SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene81262

Length: 494 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene81262
ATGGGACTTCCAGAATACTCAGGGTCTAATATTTGTGGTTGACAGCAATGATAGAGACCGTGTAGTTGAGGCTAGAGATGAATTGCACCGGATGCTGAATGTGGTGAGCTTGTCTTTGACTTGATGAACTACGTGATGCTGTCTTACTTGTATTTGCAAACAAGCAAGATCTTCCAAATGCTATGAATGCAGCAGAGATCACTGATAAGCTTGGTCTGCATTCTCTGCGTCAGCGTCATTGGTATATCCAGAGCACTTGTGCAACTTCTGGTGAAGGCCTTTATGAAGGCTTGGATTGGCTTTCAAACAACATTGCCAACAAGGCATAAACTGGAATGCATCCAATTTCTTTATTGGGCATGAACTATATTAGCCATGAGGTAGATTCCTTCAGATTACAATGATTGAGCCACTGGCATGGATTTGCTAAAGAGACCTTGACTCGATTCATTTTCTTGATAGCCTGATTGCTATGCATTTACCAACTAACTTTG

Ace file of the UniGene sp_v1.1_unigene81262

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	similar to ADP-ribosylation factor	-	-	0.0	100%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	100%
Blast2go	adp-ribosylation factor	-	-	1.4013e-45	100%

Source	GOs	Term	Type	e value	Identity
Blast2go	vesicle-mediated transport	GO:0016192	Biological Process	1.4013e-45	100%
Blast2go	intracellular protein transport	GO:0006886	Biological Process	1.4013e-45	100%
Blast2go	protein ADP-ribosylation	GO:0006471	Biological Process	1.4013e-45	100%
Blast2go	protein binding	GO:0005515	Molecular Function	1.4013e-45	100%
Blast2go	nucleotide binding	GO:0000166	Molecular Function	1.4013e-45	100%
Blast2go	intracellular membrane-bounded organelle	GO:0043231	Cellular Component	1.4013e-45	100%
Blast2go	cytoplasmic part	GO:0044444	Cellular Component	1.4013e-45	100%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PPL2

Fln msg: Separated hits, possible frame ERROR between 100 and 123, your sequence is shorter than subject: 110 - 181

Fln protein: WDFQNTQGLIFVVDSNDRDRVVEARDELHRMLxxxxxxxxxDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA*

Protein Length: 111

Fln nts: ATGGGACTTCCAGAATACTCAGGGTCTAATATTTGTGGTTGACAGCAATGATAGAGACCGTGTAGTTGAGGCTAGAGATGAATTGCACCGGATGCTGAAxxxxxxxxxxxxxxxxxxxxxxxxTGATGAACTACGTGATGCTGTCTTACTTGTATTTGCAAACAAGCAAGATCTTCCAAATGCTATGAATGCAGCAGAGATCACTGATAAGCTTGGTCTGCATTCTCTGCGTCAGCGTCATTGGTATATCCAGAGCACTTGTGCAACTTCTGGTGAAGGCCTTTATGAAGGCTTGGATTGGCTTTCAAACAACATTGCCAACAAGGCATAAACTGGAATGCATCCAATTTCTTTATTGGGCATGAACTATATTAGCCATGAGGTAGATTCCTTCAGATTACAATGATTGAGCCACTGGCATGGATTTGCTAAAGAGACCTTGACTCGATTCATTTTCTTGATAGCCTGATTGCTATGCATTTACCAACTAACTTTG

Fln Alignment:

sp_v1.1_unigene81262___FQNTQGLIFVVDSNDRDRVVEARDELHRMLNxxxxxxxxDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
C0PPL2_______________FQNTQGLIFVVDSNDRDRVVEARDELHRMLNxxxxxxxxDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain