SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene81068

Length: 281 nt

Origin of reads: Uagpf Uma

UniGene Fasta

>sp_v1.1_unigene81068
CGTCGTGACCTTGGCTGTCACTCAAACACTTCCTCTACCACTTTTTCTTACCAGTTACATTCTGAGAGGCTCCGGGGCCAGGGATATTTCAGCAACAATGCAGGGAGCTCACATATTGCTAGAGGAGCCTATTCGCTTGGCCTCCATTCTCGAGCCTGCTAAAGCAAATTTCTTTCCTGCAATGACAAAAATTATTGGTACTCTTGGACCACAGTCACGATCTGTTGAGGTGATTGAGGGTTGCCTTAAGGCTGGGATGTCTGTTGCCCGGTTTGATTTCT

Ace file of the UniGene sp_v1.1_unigene81068

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Pyruvate kinase n=1 Tax=Picea sitchensis RepID=A9NUL1_PICSI	-	-	4.0e-24	90%
FL-Next	sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	pyruvate kinase	-	-	8.23562e-24	91%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to cadmium ion	GO:0046686	Biological Process	8.23562e-24	91%
Blast2go	transferase activity	GO:0016740	Molecular Function	8.23562e-24	91%
Blast2go	plasma membrane	GO:0005886	Cellular Component	8.23562e-24	91%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Pyruvate kinase	IPR001697	-	8.23562e-24	91%
Blast2go	Pyruvate kinase, barrel	IPR015793	-	8.23562e-24	91%
Blast2go	Pyruvate/Phosphoenolpyruvate kinase	IPR015813	-	8.23562e-24	91%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NUL1

Fln msg: Distance to subject end: 466 aas, your sequence is shorter than subject: 61 - 527

Fln protein: MQGAHILLEEPIRLASILEPAKANFFPAMTKIIGTLGPQSRSVEVIEGCLKAGMSVARFDF

Protein Length: 62

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAACACTTCCTCTACCACTTTTTCTTACCAGTTACATTCTGAGAGGCTCCGGGGCCAGGGATATTTCAGCAACA_-_ATGCAGGGAGCTCACATATTGCTAGAGGAGCCTATTCGCTTGGCCTCCATTCTCGAGCCTGCTAAAGCAAATTTCTTTCCTGCAATGACAAAAATTATTGGTACTCTTGGACCACAGTCACGATCTGTTGAGGTGATTGAGGGTTGCCTTAAGGCTGGGATGTCTGTTGCCCGGTTTGATTTCT

Fln Alignment:

sp_v1.1_unigene81068___MQGAHILLEEPIRLASILEPAKANFFPAMTKIIGTLGPQSRSVEVIEGCLKAGMSVARFDF
A9NUL1_______________MQGAHLLLEEPIRMASILEPSKANFFHAMTKIVGTLGPNSRSVEVIEGCLKAGMSVARFDF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain