SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene80759

Length: 588 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene80759

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative cytosolic aldehyde dehydrogenase n=1 Tax=Oryza sativa Japonica Group RepID=Q69XE0_ORYSJ	-	-	7.00649e-44	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%
Blast2go	cytosolic aldehyde dehydrogenase	-	-	9.80909e-45	76%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Aldehyde dehydrogenase domain	IPR015590	-	9.80909e-45	76%
Blast2go	Aldehyde/histidinol dehydrogenase	IPR016161	-	9.80909e-45	76%
Blast2go	Aldehyde dehydrogenase, N-terminal	IPR016162	-	9.80909e-45	76%

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
55	14	78	7		0.999974
57		7		23	1.0
59			14	85	0.999981
63	78	7	14		0.999974
64		14	85		0.999981
70	85	14			0.999981
71	85			14	0.999981
74		14	85		0.999981
76		14		85	0.999981
78	14	85			0.999981
339			85	14	0.993533
516			33	66	0.997456
519	66		33		0.997459

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain