SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene80495

Length: 931 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene80495

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Intracellular pathogenesis-related protein PinmIII n=15 Tax=Pinus monticola RepID=O81134_PINMO	-	-	1.0e-26	77%
FL-Next	tr=Putative uncharacterized protein; Pinus sylvestris (Scots pine).	-	-	0.0	96%
Blast2go	pr10 protein	-	-	3.01772e-27	86%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Bet v I domain	IPR000916	-	3.01772e-27	86%
Blast2go	START-like domain	IPR023393	-	3.01772e-27	86%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B6VEK2

Fln msg: Separated hits, possible frame ERROR between 251 and 494, and overlapping frame ERROR between 571 and 562, your sequence is longer than subject: 203 - 161

Fln protein: MVSGTSTTEDVIQVEARRLWNATTKDSHNFLPKVLPEVFTSVTLLQGDGGVGTIKHIIFTPxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLIEGGPLGNKLSSACFVVKLVxxxxxxCVASWTCNYETLPGVQPDEGKMKEMKEDSLAI*

Protein Length: 204

Fln nts: ATCCTTCGTTTTATGCAATAATATTGAAGAAATAACTATTGTGTTGCGAGAGAGTTGAGTTGAAG_-_ATGGTGTCAGGCACTTCAACCACCGAAGATGTGATTCAAGTGGAGGCAAGGAGGTTGTGGAACGCCACAACGAAAGACAGCCACAACTTCTTGCCAAAGGTTTTGCCCGAAGTTTTCACTTCTGTGACCTTACTTCAAGGAGATGGAGGCGTGGGCACCATCAAGCATATCATCTTCACCCCTGGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATTGATTGAAGGAGGACCGCTGGGGAACAAACTGAGCTCTGCGTGCTTTGTGGTCAAATTGGTTCCxxxxxxxxxxxxxxxATGCGTAGCGAGCTGGACCTGTAACTACGAAACTCTTCCTGGTGTTCAACCTGACGAAGGAAAAATGAAAGAGATGAAGGAAGATAGCCTTGCCATCTAG___AGATAACTATACATAAATAGTTTAGAGCCGCCCGTTCACCGTGCAAAATAAAGAAGAGTGACTATATCACTTCCTCCCATCGTCATTGTCGTTTATGGGCTATAGGATGCCTTTGTCCTGTGTGCGCCTGATTGTGTGTACTTCCGTGAATTCAAATCAATGTCAGCGTTCGTTCAGTATTGTGTGTTCAGAGCGAATTCGCCTCCTTTTTATTCACTTTTCAAATTACAAAGATAGCAATCCGATTTTATAAGATAAA

Fln Alignment:

sp_v1.1_unigene80495___MVSGTSTTEDVIQVEARRLWNATTKDSHNFLPKVLPEVFTSVTLLQGDGGVGTIKHIIFTPGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLIEGGPLGNKLSSACFVVKLVPRxxxGCVASWTCNYETLPGVQPDEGKMKEMKEDSLAI*R
B6VEK2_______________MVSGTSTTEDVVQVEARRLWNATTKDSHNFLPKVLPEVFTSVTLLQGDGGVGTVKHIIFTPGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVIEGGPLGNKLSSACFVVKLVPRxxxGCVASWTCNYETLPGVQPDEGKMKELKEDSLVMLR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain