SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene80320

Length: 448 nt

Origin of reads: Biogeco_1 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene80320

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	A_thal_3526 domain containing protein	-	-	3.0e-21	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	69%
Blast2go	uncharacterized protein	-	-	1.86662e-23	75%

Source	GOs	Term	Type	e value	Identity
Blast2go	developmental process	GO:0032502	Biological Process	1.86662e-23	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Conserved hypothetical protein CHP01589, plant	IPR006476	-	1.86662e-23	75%

Full-Lengther Next Prediction

SNPs (tot: 20)

Position	A %	C %	G %	T %	Probability
123		12	87		0.992556
125	87			12	0.99256
126	87	12			0.99256
127	87		12		0.992559
128	87			12	0.992559
129			12	87	0.992555
131	87	12			0.99256
132	87	12			0.99256
133	87			12	0.99256
138		85		14	0.993533
140			85	14	0.993533
184	90		10		0.903076
187			10	90	0.903076
189		90	10		0.903076
191		10		90	0.903056
195		88	11		0.923564
199	88		11		0.923564
202		11		88	0.923564
203	11			88	0.923564
208	11			88	0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain