SustainPineDB

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Assembly info
Unigenes
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SSRs
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene79332

Length: 371 nt

UniGene Fasta

>sp_v1.1_unigene79332
ACTCTTTGTTGGCCCTCCAAACTTGGCCGTTGCTATTGGGCCTCCTAAAGGTGGCACAAAAATTTGATATAATTGTGAACAAGTGTGATCATGAAAATCAAGGCCTAGGGCCTCAATGGAAACTGGGCTGGGAGCCTATTCCAGGTGAGAGTCACTTGAACGCAATGTTAAGAGCGCAGATATTGGTAGTCTTAGCTCAGTTTGGGCATGAAGAAACTAAAGTAGAAGCGAGAAGATGATTCAATGTTTTCTTGAATGACAGAAGTACAACAATTCTACCTGCAGACATCAGAAAGGCTGCATACATAGCTGTCATGCAGAATGTCACAACCTCAGATAAATCTGGCTATGAATCTCTGTTGAGAATTTTC

Ace file of the UniGene sp_v1.1_unigene79332

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	APM1; APM1 (AMINOPEPTIDASE M1); aminopeptidase; K08776 puromycin-sensitive aminopeptidase [EC:3.4.11.-]	-	-	5.0e-24	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	89%
Blast2go	aminopeptidase-like protein	-	-	4.31831e-36	80%

Source	ECs	Term	Type	e value	Identity
Blast2go	Hydrolases, Acting on peptide bonds (peptide hydrolases), Aminopeptidases.	EC:3.4.11.-	-	4.31831e-36	80%

Source	ECs	Term	Type	e value	Identity
AutoFact	Hydrolases, Acting on peptide bonds (peptide hydrolases), Aminopeptidases.	EC:3.4.11.-	-	5.0e-24	64%

Source	GOs	Term	Type	e value	Identity
Blast2go	aminopeptidase activity	GO:0004177	Molecular Function	4.31831e-36	80%
Blast2go	plasma membrane	GO:0005886	Cellular Component	4.31831e-36	80%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NTV2

Fln msg: Distance to subject end: 146 aas, atg_distance in limit (1-15): atg_distance = 13, W2: There is no M at the beginning, your sequence is shorter than subject: 123 - 281

Fln protein: SLLALQTWPLLLGLLKVAQKFDIIVNKCDHENQGLGPQWKLGWEPIPGESHLNAMLRAQILVVLAQFGHEETKVEARR*FNVFLNDRSTTILPADIRKAAYIAVMQNVTTSDKSGYESLLRIF

Protein Length: 124

Fln nts: ACTCTTTGTTGGCCCTCCAAACTTGGCCGTTGCTATTGGGCCTCCTAAAGGTGGCACAAAAATTTGATATAATTGTGAACAAGTGTGATCATGAAAATCAAGGCCTAGGGCCTCAATGGAAACTGGGCTGGGAGCCTATTCCAGGTGAGAGTCACTTGAACGCAATGTTAAGAGCGCAGATATTGGTAGTCTTAGCTCAGTTTGGGCATGAAGAAACTAAAGTAGAAGCGAGAAGATGATTCAATGTTTTCTTGAATGACAGAAGTACAACAATTCTACCTGCAGACATCAGAAAGGCTGCATACATAGCTGTCATGCAGAATGTCACAACCTCAGATAAATCTGGCTATGAATCTCTGTTGAGAATTTTC

Fln Alignment:

sp_v1.1_unigene79332___KLGWEPIPGESHLNAMLRAQILVVLAQFGHEETKVEARR*FNVFLNDRSTTILPADIRKAAYIAVMQNVTTSDKSGYESLLRIF
A9NTV2_______________KLGWDPIPGESHLNAMLRGQILEVLAQFGDEETKVEARRRFNSFLNDRSTTLLPADIRKAAYTAVMQNVTSSDKSGYESLLRIF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain