SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene79302

Length: 365 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene79302
CGTCGTGACCTTGGCTGTCACTCAAGTTTTAGCTTTTATGGAATTTTGATTTAAGATTTCATTAAAGTGTTTAGGGAATGAATTTTGATGGAAGATTTCACCAAAGTGTTTAGGGAATTTTGATGTAAGATTTCATTGAAGTGTTTCCATTTTGGCATAGGAACGAGGCGAGATATTTTTCTTCTATAGGCCCAAGGTCAATAAGGAGGAAGCGCACAACCCAGATGATGTGCAGAGAATGTACATTGTTCTCAGGCCGGAGTCTGGAGAAAGGAGGGAGGAGGAGAAGCAGTCCTCAGACTCTGGAAAGGAGGGTAAGTTCAAGAAATCTTCTGAGAGTGAAGCCCAAGAAGAAGAAGCCAGTG

Ace file of the UniGene sp_v1.1_unigene79302

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	86%
Blast2go	uncharacterized protein	-	-	9.12169e-15	87%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: tr_plants

Fln subject: B9RHT3

Fln msg: Distance to subject end: 229 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 68 - 315

Fln protein: ERGEIFFFYRPKVNKEEAHNPDDVQRMYIVLRPESGERREEEKQSSDSGKEGKFKKSSESEAQEEEAS

Protein Length: 69

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGTTTTAGCTTTTATGGAATTTTGATTTAAGATTTCATTAAAGTGTTTAGGGAATGAATTTTGATGGAAGATTTCACCAAAGTGTTTAGGGAATTTTGATGTAAGATTTCATTGAAGTGTTTCCATTTTGGCATAGGAACGAGGCGAGATATTTTTCTTCTATAGGCCCAAGGTCAATAAGGAGGAAGCGCACAACCCAGATGATGTGCAGAGAATGTACATTGTTCTCAGGCCGGAGTCTGGAGAAAGGAGGGAGGAGGAGAAGCAGTCCTCAGACTCTGGAAAGGAGGGTAAGTTCAAGAAATCTTCTGAGAGTGAAGCCCAAGAAGAAGAAGCCAGTG

Fln Alignment:

sp_v1.1_unigene79302___ERGEIFFFYRPKVNKEEAHNPDDVQRMYIVLRPESGERREEEKQ
B9RHT3_______________ERGEIFFFYRPKVEKEEAHSPDDVQRLYVVLRPESGERSLEEKQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain