SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene79003

Length: 620 nt

Origin of reads: Biogeco_1

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene79003

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PREDICTED: similar to histone H4 n=1 Tax=Mus musculus RepID=UPI0000D66417	-	-	7.0e-39	70%
FL-Next	sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	100%
Blast2go	histone h4	-	-	2.19503e-38	98%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to water deprivation	GO:0009414	Biological Process	2.19503e-38	98%
Blast2go	chromosome organization	GO:0051276	Biological Process	2.19503e-38	98%
Blast2go	binding	GO:0005488	Molecular Function	2.19503e-38	98%
Blast2go	nucleolus	GO:0005730	Cellular Component	2.19503e-38	98%
Blast2go	vacuole	GO:0005773	Cellular Component	2.19503e-38	98%
Blast2go	plasma membrane	GO:0005886	Cellular Component	2.19503e-38	98%
Blast2go	chromosome	GO:0005694	Cellular Component	2.19503e-38	98%
Blast2go	chloroplast	GO:0009507	Cellular Component	2.19503e-38	98%
Blast2go	thylakoid	GO:0009579	Cellular Component	2.19503e-38	98%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Histone H4	IPR001951	-	2.19503e-38	98%
Blast2go	Histone core	IPR007125	-	2.19503e-38	98%
Blast2go	Histone-fold	IPR009072	-	2.19503e-38	98%
Blast2go	Histone H4, conserved site	IPR019809	-	2.19503e-38	98%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
169	50	50			1.0
171		50	50		1.0
173			50	50	1.0
174			50	50	1.0
241			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain