SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene78909

Length: 570 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene78909

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA	-	-	3.0e-34	81%
FL-Next	sp=Ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	100%
Blast2go	protein	-	-	4.78855e-36	97%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell wall	GO:0005618	Cellular Component	4.78855e-36	97%
Blast2go	cytosolic small ribosomal subunit	GO:0022627	Cellular Component	4.78855e-36	97%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ribosomal protein S27e	IPR000592	-	4.78855e-36	97%
Blast2go	Ribosomal protein, zinc-binding domain	IPR011332	-	4.78855e-36	97%
Blast2go	Ribosomal protein S27e, zinc-binding domain	IPR023407	-	4.78855e-36	97%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
286	85		14		0.999981
293	85	14			0.999981

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain