SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene78848

Length: 414 nt

UniGene Fasta

>sp_v1.1_unigene78848
CGTCGTGACCTTGGCTGTCACTCAGATGATTATCTTGATGTTCAAGATGATCTATGTGATGACATCCCTCCAGAGCTCGAGAAATACCAGGAGCTCAAATCTCGCTATGGGTCGCTATTTGTGAGCAAAAATGGAGAGAGGTTGCCAGAGGAGTTTGTGGAAACCGACTATTACAATGACCTGAACGCCATCGACAAGGTTCATTGCCCGCCTGGAGAAGCGTTTATAAAGCTGGATTGCAATGGCGGATCGTATTTCCGTTTGGCTTATCAGGAGGATACTGGATTAGTGGTCAAGTAGTCGCTTGGCCTCTCATACAGTCCTCGCCCAACATAATAATGTTCCTGATGCATCCACTTTATGAATCGTACGGGTGACCATTGGTCACATCTCCCAGTTAGCACATGGCAAGCA

Ace file of the UniGene sp_v1.1_unigene78848

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	1,3-beta-glucan synthase, putative (EC:2.4.1.34); K11000 callose synthase [EC:2.4.1.-]	-	-	4.0e-11	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Blast2go	unknown [Picea sitchensis]	-	-	8.19723e-32	87%

Source	ECs	Term	Type	e value	Identity
AutoFact	Transferases, Glycosyltransferases, Hexosyltransferases.	EC:2.4.1.-	-	4.0e-11	67%

Source	KEGGs	Term	e value	Identity
AutoFact	Fructose and mannose metabolism	00051	4.0e-11	67%
AutoFact	N-Glycan biosynthesis	00510	4.0e-11	67%
AutoFact	Mucin type O-Glycan biosynthesis	00512	4.0e-11	67%
AutoFact	Various types of N-glycan biosynthesis	00513	4.0e-11	67%
AutoFact	Other types of O-glycan biosynthesis	00514	4.0e-11	67%
AutoFact	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	4.0e-11	67%
AutoFact	Glycosaminoglycan biosynthesis - keratan sulfate	00533	4.0e-11	67%
AutoFact	Lipopolysaccharide biosynthesis	00540	4.0e-11	67%
AutoFact	Peptidoglycan biosynthesis	00550	4.0e-11	67%
AutoFact	Glycerolipid metabolism	00561	4.0e-11	67%
AutoFact	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis	00563	4.0e-11	67%
AutoFact	Sphingolipid metabolism	00600	4.0e-11	67%
AutoFact	Glycosphingolipid biosynthesis - lacto and neolacto series	00601	4.0e-11	67%
AutoFact	Glycosphingolipid biosynthesis - globo series	00603	4.0e-11	67%
AutoFact	Glycosphingolipid biosynthesis - ganglio series	00604	4.0e-11	67%
AutoFact	Carotenoid biosynthesis	00906	4.0e-11	67%
AutoFact	Zeatin biosynthesis	00908	4.0e-11	67%
AutoFact	Flavonoid biosynthesis	00941	4.0e-11	67%
AutoFact	Anthocyanin biosynthesis	00942	4.0e-11	67%
AutoFact	Flavone and flavonol biosynthesis	00944	4.0e-11	67%
AutoFact	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	4.0e-11	67%
AutoFact	Betalain biosynthesis	00965	4.0e-11	67%
AutoFact	Biosynthesis of type II polyketide products	01057	4.0e-11	67%
AutoFact	Metabolic pathways	01100	4.0e-11	67%
AutoFact	Biosynthesis of secondary metabolites	01110	4.0e-11	67%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NL35

Fln msg: query STOP codon too far from subject stop. Distance to subject end: 33 aas, putative chimeric sequence, your sequence is shorter than subject: 100 - 176

Fln protein: RRDLGCHSDDYLDVQDDLCDDIPPELEKYQELKSRYGSLFVSKNGERLPEEFVETDYYNDLNAIDKVHCPPGEAFIKLDCNGGSYFRLAYQEDTGLVVK*

Protein Length: 101

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGATGATTATCTTGATGTTCAAGATGATCTATGTGATGACATCCCTCCAGAGCTCGAGAAATACCAGGAGCTCAAATCTCGCTATGGGTCGCTATTTGTGAGCAAAAATGGAGAGAGGTTGCCAGAGGAGTTTGTGGAAACCGACTATTACAATGACCTGAACGCCATCGACAAGGTTCATTGCCCGCCTGGAGAAGCGTTTATAAAGCTGGATTGCAATGGCGGATCGTATTTCCGTTTGGCTTATCAGGAGGATACTGGATTAGTGGTCAAGTAG___TCGCTTGGCCTCTCATACAGTCCTCGCCCAACATAATAATGTTCCTGATGCATCCACTTTATGAATCGTACGGGTGACCATTGGTCACATCTCCCAGTTAGCACATGGCAAGCA

Fln Alignment:

sp_v1.1_unigene78848___IPPELEKYQELKSRYGSLFVSKNGERLPEEFVETDYYNDLNAIDKVHCPPGEAFIKLDCNGGSYFRLAYQEDTGLV
A9NL35_______________IPPELKKYQELESRSESLFVSENGERLPEEFVETDYYKDLNAIDKVHHPPGEAFIKLDCNGGSYFRLAFQEETGLM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain