SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene78577

Length: 336 nt

UniGene Fasta

>sp_v1.1_unigene78577
CGTCGTGACCTTGGCTGTCACTCAATTACTGACCACTCCAGTTTTTACCTATTCCTTTTTTCTTGGTGCTATTGCTTGTCTCTCTGAGAACTTTCAGTTTTGTTTCAAGAAAAAGCTATGGCTAAGGAAGGTGGCAAAGAAGTTGAGCAGCAGCTTATCATCAGTACATTCTGAGAGCAGGGGCCATCAAGGCCCTGGGATCCTTCCGCAGCAACCCCCATGTTTAGAGCTTCTTCTCTTGTAAGAGGCCCTTGTAATAAAGCATACTGCTGCTGATTCTGTTGAAAGTCCAGGGTGATGATGAGGAGCTCGTTTTTGCCATGAAATAGCTCTCAG

Ace file of the UniGene sp_v1.1_unigene78577

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Probable aquaporin n=4 Tax=Picea RepID=O65045_PICMA	-	-	1.0e-06	100%
FL-Next	tr=Probable aquaporin; Picea mariana (Black spruce) (Abies mariana).	-	-	0.0	100%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: O65045

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 75 - 282

Fln protein: S*PWLSLNY*PLQFLPIPFFLVLLLVSLRTFSFVSRKSYG*GRWQRS*AAAYHQYILRAGAIKALGSFRSNPHV*

Protein Length: 76

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTACTGACCACTCCAGTTTTTACCTATTCCTTTTTTCTTGGTGCTATTGCTTGTCTCTCTGAGAACTTTCAGTTTTGTTTCAAGAAAAAGCTATGGCTAAGGAAGGTGGCAAAGAAGTTGAGCAGCAGCTTATCATCAGTACATTCTGAGAGCAGGGGCCATCAAGGCCCTGGGATCCTTCCGCAGCAACCCCCATGTTTAG___AGCTTCTTCTCTTGTAAGAGGCCCTTGTAATAAAGCATACTGCTGCTGATTCTGTTGAAAGTCCAGGGTGATGATGAGGAGCTCGTTTTTGCCATGAAATAGCTCTCAG

Fln Alignment:

sp_v1.1_unigene78577___AAAYHQYILRAGAIKALGSFRSNPHV
O65045_______________AAAYHQYILRAGAIKALGSFRSNPHV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain