SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene78057

Length: 395 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene78057
CGTCGTGACCTTGGCTGTCACTCAATTCATAAGAAGACGAAAAGAGACATTGAAACCTGCACTCCTTCACAAGTCAGGAGATCGACTTCCCCGGCCGCTGAAGAATTCGTCGTTCCTGGTTTCACTTGTCTCTGAAATCGGCTGACTTGTGTCGTTGAGTGTATTCAGATCAGGTAATTCGAAATGGCGGAAGAGAAGTTCAATATGAAGAATCCTGCTGTGAAGAGGATCCTGCAGGAGGTGAAGGAAATGCAGAACAATCCCAGCGATGACTATATGAGCCTTCCATTGGAGGATAATATTTTCGAGTGGCAGTTTGCCATTAGAGGACCTCGGGATGCGGAGTTTGAAGGCGGGATTTATCATGGTCGAATCCAGTTGCCTCCAGATTACCC

Ace file of the UniGene sp_v1.1_unigene78057

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	non-canonical ubiquitin conjugating enzyme, putative (EC:6.3.2.19); K10578 ubiquitin-conjugating enzyme E2 J1 [EC:6.3.2.19]	-	-	1.0e-29	84%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	97%
Blast2go	ubiquitin-conjugating enzyme e2	-	-	2.22011e-32	93%

Source	ECs	Term	Type	e value	Identity
Blast2go	Ubiquitin--protein ligase.	EC:6.3.2.19	-	2.22011e-32	93%

Source	ECs	Term	Type	e value	Identity
AutoFact	Ubiquitin--protein ligase.	EC:6.3.2.19	-	1.0e-29	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	ubiquitin-dependent protein catabolic process	GO:0006511	Biological Process	2.22011e-32	93%
Blast2go	ubiquitin-protein ligase activity	GO:0004842	Molecular Function	2.22011e-32	93%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LP14

Fln msg: Distance to subject end: 237 aas, your sequence is shorter than subject: 70 - 307

Fln protein: MAEEKFNMKNPAVKRILQEVKEMQNNPSDDYMSLPLEDNIFEWQFAIRGPRDAEFEGGIYHGRIQLPPDY

Protein Length: 71

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTCATAAGAAGACGAAAAGAGACATTGAAACCTGCACTCCTTCACAAGTCAGGAGATCGACTTCCCCGGCCGCTGAAGAATTCGTCGTTCCTGGTTTCACTTGTCTCTGAAATCGGCTGACTTGTGTCGTTGAGTGTATTCAGATCAGGTAATTCGAA_-_ATGGCGGAAGAGAAGTTCAATATGAAGAATCCTGCTGTGAAGAGGATCCTGCAGGAGGTGAAGGAAATGCAGAACAATCCCAGCGATGACTATATGAGCCTTCCATTGGAGGATAATATTTTCGAGTGGCAGTTTGCCATTAGAGGACCTCGGGATGCGGAGTTTGAAGGCGGGATTTATCATGGTCGAATCCAGTTGCCTCCAGATTACCC

Fln Alignment:

sp_v1.1_unigene78057___EKFNMKNPAVKRILQEVKEMQNNPSDDYMSLPLEDNIFEWQFAIRGPRDAEFEGGIYHGRIQLPPDY
B8LP14_______________DKFNMKNPAVKRILQEVKEMQNNPSDDYMSLPLEDNIFEWQFAIRGPRDTEFEGGIYHGRIQLPPDY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain