SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene77783

Length: 389 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene77783
CGTCGTGACCTTGGCTGTCACTCATTTAACTGGTTTCTTGTCCTGCCCTGCTTCTGCTTCAGGTGGACACACAATTGGCCGTGCTCACTGCAACTCCTTCGATAACCGATTATATGTCGTGACCTTGGGTCACTCAATTATGGCTCAAAATCTAGCAAACAGTTTGGCAGACGATCTTTATTCATTATGCCCCACTGTCAATAACACCGTGGACTTCACAAACTTGGATGTCCAGACTCCGAACGCTTTCGACAAGAAATACTACGTGAATCTGCAGAAGAACAAAGGGCTCCTCACCTCCGACCAGAGTCTCTACACAGACTCCACCGATAGTGAAGACATTGTTGACAGCTTTGCATCCAGCCAGACCGTGTTCTTCAAAAAGTTTG

Ace file of the UniGene sp_v1.1_unigene77783

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Peroxidase-like protein (Fragment) n=14 Tax=Picea sitchensis RepID=E0Z9M2_PICSI	-	-	1.0e-37	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	69%
Blast2go	peroxidase-like protein	-	-	2.02207e-38	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Plant peroxidase	IPR000823	-	2.02207e-38	77%
Blast2go	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	2.02207e-38	77%
Blast2go	Haem peroxidase	IPR010255	-	2.02207e-38	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NU81

Fln msg: Distance to subject end: 57 aas, your sequence is shorter than subject: 129 - 389

Fln protein: VVTLAVTHLTGFLSCPASASGGHTIGRAHCNSFDNRLYVVTLGHSIMAQNLANSLADDLYSLCPTVNNTVDFTNLDVQTPNAFDKKYYVNLQKNKGLLTSDQSLYTDSTDSEDIVDSFASSQTVFFKKF

Protein Length: 130

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTAACTGGTTTCTTGTCCTGCCCTGCTTCTGCTTCAGGTGGACACACAATTGGCCGTGCTCACTGCAACTCCTTCGATAACCGATTATATGTCGTGACCTTGGGTCACTCAATTATGGCTCAAAATCTAGCAAACAGTTTGGCAGACGATCTTTATTCATTATGCCCCACTGTCAATAACACCGTGGACTTCACAAACTTGGATGTCCAGACTCCGAACGCTTTCGACAAGAAATACTACGTGAATCTGCAGAAGAACAAAGGGCTCCTCACCTCCGACCAGAGTCTCTACACAGACTCCACCGATAGTGAAGACATTGTTGACAGCTTTGCATCCAGCCAGACCGTGTTCTTCAAAAAGTTTG

Fln Alignment:

sp_v1.1_unigene77783___SGGHTIGRAHCNSFDNRLYVVTLGHSIMAQNLANSLADDLYSLCPTVNNTVDFTNLDVQTPNAFDKKYYVNLQKNKGLLTSDQSLYTDSTDSEDIVDSFASSQTVFFKKF
A9NU81_______________SGGHTIGIAHCNSFDNRLYNTSTGEAIVDPTLENSFASNLYSICPAVNDTVNTADLDVLTPNYFDNSYYVNVQRNQALFTSDQSLYTDSTDSGDIVDSFASKKTVFFKKF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain