SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene77629

Length: 594 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene77629

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cellulose synthase-like protein n=4 Tax=Malpighiales RepID=B9IPJ4_POPTR	-	-	79%
FL-Next	tr=Cellulose synthase catalytic subunit; Pinus radiata (Monterey pine) (Pinus insignis).	-	-	45%
Blast2go	cellulose synthase-like d3- glycosyltransferase family 2 protein	-	-	82%

Source	GOs	Term	Type	Identity
Blast2go	root hair elongation	GO:0048767	Biological Process	82%
Blast2go	response to cold	GO:0009409	Biological Process	82%
Blast2go	transferase activity	GO:0016740	Molecular Function	82%
Blast2go	integral to Golgi membrane	GO:0030173	Cellular Component	82%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cellulose synthase	IPR005150	-	0.0	82%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
379			83	16	0.994512
382			16	83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain