SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene77560

Length: 531 nt

Origin of reads: Biogeco_1 Uagpf

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene77560 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	transporter-related	-	-	9.00054e-42	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	protein	-	-	2.15239e-42	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Major facilitator superfamily	IPR011701	-	2.15239e-42	75%
Blast2go	Major facilitator superfamily domain, general substrate transporter	IPR016196	-	2.15239e-42	75%
Blast2go	Major facilitator superfamily domain	IPR020846	-	2.15239e-42	75%

Full-Lengther Next Prediction

SNPs (tot: 44)

Position	A %	C %	G %	T %	Probability
355		88		11	0.923564
356			11	88	0.923564
357	11	88			0.923564
358		88	11		0.923564
360	88		11		0.923569
362	88	11			0.923569
364			11	88	0.923564
365		11	88		0.923564
368	11			88	0.923564
369	88		11		0.923564
373	11		88		0.923564
374		11		88	0.923564
378			11	88	0.923564
421		87	12		0.992554
425			25	75	1.0
428	87		12		0.992554
429			12	87	0.992554
430		12	87		0.992554
431	12	12	75		0.975346
432	87	12			0.992554
436	75	12	12		0.975346
437		12		87	0.992554
438	87	12			0.992554
440	75	12	12		0.975346
445		25		75	1.0
448	85		14		0.993533
449	66		33		1.0
450		66		33	1.0
451	66		33		1.0
452	33			66	1.0
453	66	33			1.0
456	50	33			1.0
457	50	33			1.0
460	66		33		1.0
461	50		50		1.0
463		33	66		1.0
465		33	33	33	1.0
475	50			50	1.0
476			50	50	1.0
478	50			50	1.0
481	50	50			1.0
482			50	50	1.0
483	50			50	1.0
484		50		50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain