SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene77481

Length: 1007 nt

Origin of reads: Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene77481

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Glucose-1-phosphate adenylyltransferase (Fragment) n=1 Tax=Vitis vinifera RepID=E0CQG1_VITVI	-	-	9.80909e-45	74%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	37%
Blast2go	adp-glucose pyrophosphorylase large subunit	-	-	0.0	89%

Source	ECs	Term	Type	e value	Identity
Blast2go	Glucose-1-phosphate adenylyltransferase.	EC:2.7.7.27	-	0.0	89%

Source	KEGGs	Term	Identity
Blast2go	Starch and sucrose metabolism	00500	89%
Blast2go	Amino sugar and nucleotide sugar metabolism	00520	89%
Blast2go	Metabolic pathways	01100	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	glucose-1-phosphate adenylyltransferase activity	GO:0008878	Molecular Function	0.0	89%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Trimeric LpxA-like	IPR011004	-	0.0	89%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AC84

Fln msg: Separated hits, possible frame ERROR between 367 and 373,

Fln protein: LASRLLFYVQPPKFLFYDPMKPIFTSPCFLPPTKIERCRVSKAIIRISIFVLMMISVCGMCSLP*LPASY*S**TRADLDFSKLIASGIGFNNFTWMFSQRMQCRAFRVGIRSRLEYGVELxxxLMMGADNYETEAEIASLLAEGKVPIGVGENTKIRNCIIDKNARIGKNVVIVNTDNVEEAERPSEGYYIRSGITVILKNSRIKDGTVI*

Protein Length: 213

Fln nts: CTTGGCTTCTAGACTCCTTTTCTATGTGCAGCCTCCAAAGTTCTTATTTTATGATCCCATGAAGCCTATCTTTACTTCGCCTTGTTTTCTTCCACCAACGAAAATAGAAAGATGTCGGGTAAGCAAGGCCATTATTCGCATTAGTATTTTTGTGCTTATGATGATTTCAGTTTGTGGCATGTGCTCTCTCCCTTGATTGCCAGCATCGTATTAAAGCTAATAAACCCGAGCTGATCTAGATTTTTCAAAACTAATTGCCTCAGGTATTGGATTCAATAATTTCACATGGATGTTTTCTCAGAGAATGCAGTGTAGAGCATTCCGTGTAGGAATTCGTTCACGATTGGAATATGGTGTTGAGTTGAAxxxxxxTTTGATGATGGGAGCTGACAATTATGAAACTGAAGCTGAAATTGCGTCCCTCTTAGCTGAAGGGAAAGTGCCTATTGGTGTTGGGGAGAATACAAAAATAAGGAATTGTATTATTGACAAAAATGCAAGAATTGGAAAGAATGTTGTGATTGTGAACACGGATAATGTGGAAGAAGCAGAGAGACCATCAGAAGGATATTACATCCGTTCAGGCATTACTGTAATATTGAAGAACTCCAGAATTAAAGATGGCACTGTAATATAAAGGAGTCCCCATTGTCCCGAGGCAAGCAAAAGCAACACGGAAGTATGGACTTTATATGGCATATAAACAGTACGTGCCCAAGGAAGAGAGTACACACGCTTTTGGCCTTTTAAAAGCAGAGTGGAAACCTGGAGGGACCATAAAGATGTATCCTAGCAGTAGCCGTCAAGAGTTGCACTTGGACGTGATGGATGGAGACAATAGTCGAACTGCACCACTGTTCCAAATTGAACAAGTTTCTCTGGCCAGGGACTGCTAATTATCTATTAATAAATATAAAGTCAGCAGTGTACTTGGAATGACTTGCTAGAAATGTACAGATGTATTATCCTTTAATTAATAATCTAAAGGGGACGTGGATTCTCTCTTGT

Fln Alignment:

sp_v1.1_unigene77481___SRLLFYVQPPKFLFYDPMKPIFTSPCFLPPTKIERCRVSKAIIRISIFVLMMISVCGMCSLP*LPASY*S**TRADLDFSKLIASGIGFNNFTWMFSQRMQCRAFRVGIRSRLEYGVELKxxLMMGADNYETEAEIASLLAEGKVPIGVGENTKIRNCIIDKNARIGKNVVIVNTDNVEEAERPSEGYYIRSGITVILKNSRIKDGTVI
D5AC84_______________ANLALAAQPPKFHFYDPMKPIFTSPQFLPPTKIEKCQVLDSIISHGCFL------------------------------------------------QECTVEHSVVGIRSRLEYGAELKxxMMMGADYYETEAEIASLLAEGKVPIGVGENTKIRNCIIDKNARIGKNVVIANSDNVEEAERPSEGYYIRSGITVILKNSRIKDGTVI

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
841			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain