SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene77351

Length: 983 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene77351 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	epoxide hydrolase, putative (EC:2.7.10.2)	-	-	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	80%
Blast2go	protein	-	-	71%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	71%
Blast2go	Epoxide hydrolase-like	IPR000639	-	0.0	71%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NVJ5

Fln msg: warning!, putative chimeric sequence! or repetitive structure your sequence is shorter than subject: 267 - 314

Fln protein: MIALAEAGLRAIAPDFRGYGLSDQPSEPEKAGFYDLVEDMVGLLAALGIDKVLVVGKDFGAIVAYYLDLCHPDRVKGIVTLGIPYLKPGGLDKWDSAPKGLYIRHWQEPGRGLADLGRFDVKAVVRNIYTLFSSCELPVAEDGKEVMDLYDPSKPLPPWFTEDDLQMYSSLYEKSGFVFPMQVPYLCSKRDPGRLTLFSEHTIQAPSLLILGTKDYFMKFPGVEYYVNSEMIKSAVPNLEIKFFQKEAILSRNSFQRKWINFSLAF*

Protein Length: 268

Fln nts: ATGATAGCATTGGCAGAAGCAGGGTTGCGTGCAATTGCTCCCGATTTTCGAGGTTATGGGCTCTCTGATCAGCCCTCTGAACCAGAGAAAGCTGGATTTTATGATCTTGTTGAAGACATGGTTGGCTTACTGGCTGCCTTGGGTATTGATAAAGTGTTGGTTGTGGGGAAGGATTTTGGAGCAATTGTTGCATATTATTTAGATCTGTGTCATCCAGATCGAGTAAAAGGAATTGTAACGTTGGGTATACCTTACTTGAAACCCGGAGGACTGGATAAATGGGACTCAGCTCCTAAAGGCCTCTATATTAGACATTGGCAGGAACCTGGGAGAGGCTTGGCAGATCTTGGGCGTTTTGATGTAAAAGCAGTGGTAAGGAATATATATACGCTTTTCTCTAGTTGTGAACTGCCTGTGGCAGAAGATGGTAAGGAGGTAATGGATCTCTATGATCCTTCCAAACCATTGCCACCATGGTTCACTGAGGATGATCTTCAGATGTATTCAAGCCTGTATGAGAAATCTGGTTTTGTGTTCCCTATGCAAGTCCCATACCTCTGCAGCAAAAGGGATCCAGGGAGATTGACCCTTTTCAGTGAACACACTATTCAAGCTCCTTCCCTTCTGATCTTGGGTACCAAGGATTATTTTATGAAATTTCCGGGAGTGGAGTATTATGTCAACAGTGAGATGATAAAGTCTGCTGTGCCCAATCTAGAGATCAAATTTTTCCAGAAGGAAGCCATTTTGTCCAGGAACAGTTTCCAGAGGAAGTGGATAAACTTCTCCTTGGCTTTCTGA___ATCAGCACCTGTGAGTGGATATCAAACAAAGGAGAACATGCAAGGCACAGAGCATCAATATTGGAACATTGATATTAGAAAGTTTTCAAGGTACAAGGTTTCAAATAAGCATATATATGCTCTCTGTTATTAGTTAGAGCTTGGGGTTAATCAAATGCATTTCTGTTTCCAAATTTTATCTT

Fln Alignment:

sp_v1.1_unigene77351___MIALAEAGLRAIAPDFRGYGLSDQPSEPEKAGFYDLVEDMVGLLAALGIDKVLVVGKDFGAIVAYYLDLCHPDRVKGIVTLGIPYLKPGGLDKWDSAPKGLYIRHWQEPGRGLADLGRFDVKAVVRNIYTLFSSCELPVAEDGKEVMDLYDPSKPLPPWFTEDDLQMYSSLYEKSGFVFPMQVPYLCSKRDPGRLTLFSEHTIQAPSLLILGTKDYFMKFPGVEYYVNSEMIKSAVPNLEIKFFQKEAILSRNSFQRKWINFSLAF
A9NVJ5_______________MIALAEAGFHAIAPDFRGYGLSDQPSEPEKAVYYDLVEDMAGLLDALGIEKVFVVGKDFGAAVAYYFDLCHPDRVKGIVTLGIPYMKPGGKGNWDSAPKGLYFLHWQEPGRGLADLGRFDVKTVVRNIYTLFSSSELPVAEDGKEVMDLYNPSIPLPPWFSEDDLQMYSSLYEKSGFVFPIQVPYLCSKRDIGGLANFKDRTIQAPCLLILGTKDYFLKFPGVEYYVNSEMLKSCVPNLEIKFFPEGSHFVQEQFPEEVNKLLLGF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain