SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene77235

Length: 320 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene77235
CGTCGTGACCTTGGTGTCCTTGGGTTTCACTGACCTTTGTTGGACATAGCATCACGAAGAATGGGGACCTTTAATGAGCAATTCATCATGGAACCAGGAGAGCAGATTGGATGTTATTATATATATAAGCAGGAGCTGTCCATCCAACAGTGAAAAAATGCATACAACCAAATTGTCTTTTTGCTTCCGTACAGTCTATATTCTCTGGTACAGGAGCCCAAGAACAGGAAGTTTGTGAAGGGAGTTTCCATCATTGCAGTTGTAGCAGGGGTTGGAAGATTCCTTGATGTTATAGCTTGTATGCATCAGGTATCACCATC

Ace file of the UniGene sp_v1.1_unigene77235

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	serine/threonine protein kinase, putative (EC:2.7.12.2)	-	-	2.0e-06	67%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	71%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: A9T1K8

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 51 - 515

Fln protein: RRDLGVLGFH*PLLDIASRRMGTFNEQFIMEPGEQIGCYYIYKQELSIQQ*

Protein Length: 52

Fln nts: CGTCGTGACCTTGGTGTCCTTGGGTTTCACTGACCTTTGTTGGACATAGCATCACGAAGAATGGGGACCTTTAATGAGCAATTCATCATGGAACCAGGAGAGCAGATTGGATGTTATTATATATATAAGCAGGAGCTGTCCATCCAACAGTGA___AAAAATGCATACAACCAAATTGTCTTTTTGCTTCCGTACAGTCTATATTCTCTGGTACAGGAGCCCAAGAACAGGAAGTTTGTGAAGGGAGTTTCCATCATTGCAGTTGTAGCAGGGGTTGGAAGATTCCTTGATGTTATAGCTTGTATGCATCAGGTATCACCATC

Fln Alignment:

sp_v1.1_unigene77235___PLLDIASRRMGTFNEQFIMEPGEQIGCYYIYKQELSIQQ
A9T1K8_______________PCMDVEKRRMGTFNEQFCMEPGEQMGSFYISKQELYIQQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain