SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene77195

Length: 350 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v1.1_unigene77195
ATGGGGAGATCTGCAAACATCGAGCTGAGAGGAGCTTTCGGATAGTCCATAAAGTGAAAGGTGCAACAGGGATCTGCAAACTCCGAGAGTAGGTACACCATGAATACTAAGGAAGACAGCAAGGAGAACTGTTCAGGATGGGCAGCTCGAGATCCATCAGGTGTTTTGTCACCTTACCAATTTAACCGAAGGTACTGCTTTAAGATACCAGACAATCTACCACTGGCTTCAGCTGCACCTTTGCTCTGTGCAGGAATTACTGTTTACAGCCCTATGATTCGTCATCACATGAATCATGCAGGCAAGTCTCTTGGAGTAATTGGGCTAGGAGGTCTTGGTCATATGGCAGT

Ace file of the UniGene sp_v1.1_unigene77195 (antisense)

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Probable cinnamyl alcohol dehydrogenase 1 n=2 Tax=Oryza sativa RepID=CADH1_ORYSJ	-	-	6.0e-13	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	mannitol expressed	-	-	7.60837e-17	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	Cinnamyl-alcohol dehydrogenase.	EC:1.1.1.195	-	7.60837e-17	84%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Phenylpropanoid biosynthesis	00940		7.60837e-17	84%
Blast2go	Biosynthesis of phenylpropanoids	01061		7.60837e-17	84%
Blast2go	Metabolic pathways	01100		7.60837e-17	84%
Blast2go	Biosynthesis of secondary metabolites	01110		7.60837e-17	84%
Blast2go	Glutathione gamma-glutamylcysteinyltransferase.	EC:2.3.2.15	-	7.60837e-17	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	defense response by callose deposition in cell wall	GO:0052544	Biological Process	7.60837e-17	84%
Blast2go	cell death	GO:0008219	Biological Process	7.60837e-17	84%
Blast2go	defense response to bacterium	GO:0042742	Biological Process	7.60837e-17	84%
Blast2go	phytochelatin biosynthetic process	GO:0046938	Biological Process	7.60837e-17	84%
Blast2go	immune response	GO:0006955	Biological Process	7.60837e-17	84%
Blast2go	response to arsenic-containing substance	GO:0046685	Biological Process	7.60837e-17	84%
Blast2go	lignin biosynthetic process	GO:0009809	Biological Process	7.60837e-17	84%
Blast2go	indole glucosinolate catabolic process	GO:0042344	Biological Process	7.60837e-17	84%
Blast2go	response to cadmium ion	GO:0046686	Biological Process	7.60837e-17	84%
Blast2go	copper ion binding	GO:0005507	Molecular Function	7.60837e-17	84%
Blast2go	cinnamyl-alcohol dehydrogenase activity	GO:0045551	Molecular Function	7.60837e-17	84%
Blast2go	glutathione gamma-glutamylcysteinyltransferase activity	GO:0016756	Molecular Function	7.60837e-17	84%
Blast2go	protein binding	GO:0005515	Molecular Function	7.60837e-17	84%
Blast2go	cadmium ion binding	GO:0046870	Molecular Function	7.60837e-17	84%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Alcohol dehydrogenase superfamily, zinc-type	IPR002085	-	7.60837e-17	84%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NK95

Fln msg: Distance to subject end: 157 aas, your sequence is shorter than subject: 83 - 356

Fln protein: MNTKEDSKENCSGWAARDPSGVLSPYQFNRRYCFKIPDNLPLASAAPLLCAGITVYSPMIRHHMNHAGKSLGVIGLGGLGHMA

Protein Length: 84

Fln nts: ATGGGGAGATCTGCAAACATCGAGCTGAGAGGAGCTTTCGGATAGTCCATAAAGTGAAAGGTGCAACAGGGATCTGCAAACTCCGAGAGTAGGTACACC_-_ATGAATACTAAGGAAGACAGCAAGGAGAACTGTTCAGGATGGGCAGCTCGAGATCCATCAGGTGTTTTGTCACCTTACCAATTTAACCGAAGGTACTGCTTTAAGATACCAGACAATCTACCACTGGCTTCAGCTGCACCTTTGCTCTGTGCAGGAATTACTGTTTACAGCCCTATGATTCGTCATCACATGAATCATGCAGGCAAGTCTCTTGGAGTAATTGGGCTAGGAGGTCTTGGTCATATGGCAGT

Fln Alignment:

sp_v1.1_unigene77195___MNTKEDSKENCSGWAARDPSGVLSPYQFNRR
A9NK95_______________MNTKEDCKENCKGWAARDPSGVLSPYQFNRR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain