SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene76806

Length: 354 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene76806
CCCACGTTTTGGAAGTACTGGAAAGGAGACAGAAGCTGACAACAGAAAGAGTCTTAGCTAACGCTAAAGCTATCTGCGAGCAACGCAATGTCAACGTGGAAACTAAAAATGGTGACAGGAGATGCCCGGTATGCTCTCTGTGAAGCTGCTGAAAAGATGAAGGGCAGTTATGGGGAGCGTCAGCAATTACTGTGCACATCATGCTAAGTGCCCGGTGTTGATTGTGAAGAAACCAAATCAGTGAACCCAACAATGTCATGTAAAGTACCCGGTGTTGATTGTGAAGAAACCGAATCAGTGAATTGCACAGTGATGTCAATACCCAAATTTGGTTTCTTCACAATCAACACCGGG

Ace file of the UniGene sp_v1.1_unigene76806

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative universal stress protein (Fragment) n=1 Tax=Mirabilis jalapa RepID=Q6PP05_MIRJA	-	-	3.0e-07	80%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	42%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NRY7

Fln msg: Separated hits, possible frame ERROR between 134 and 161, your sequence is shorter than subject: 81 - 153

Fln protein: HVLEVLERRQKLTTERVLANAKAICEQRNVNVETKNGDRRCPVxxxxxxxxxxRAVMGSVSNYCAHHAKCPVLIVKKPNQ*

Protein Length: 82

Fln nts: CCCACGTTTTGGAAGTACTGGAAAGGAGACAGAAGCTGACAACAGAAAGAGTCTTAGCTAACGCTAAAGCTATCTGCGAGCAACGCAATGTCAACGTGGAAACTAAAAATGGTGACAGGAGATGCCCGGTATGxxxxxxxxxxxxxxxxxxxxxxxxxxxAAGGGCAGTTATGGGGAGCGTCAGCAATTACTGTGCACATCATGCTAAGTGCCCGGTGTTGATTGTGAAGAAACCAAATCAGTGAACCCAACAATGTCATGTAAAGTACCCGGTGTTGATTGTGAAGAAACCGAATCAGTGAATTGCACAGTGATGTCAATACCCAAATTTGGTTTCTTCACAATCAACACCGGG

Fln Alignment:

sp_v1.1_unigene76806___VLEVLERRQKLTTERVLANAKAICEQRNVNVETKN--GDRRCPVCxxxxxxxxxRAVMGSVSNYCAHHAKCPVLIVKKPN
A9NRY7_______________LIETIFHQQKQVSEEILARAKGICAQKNVIVETLSEIGDPKDAICxxxxxxxxxRAFLGSVSNYCVQYAKCPVLVTRKPS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain