SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene76095

Length: 385 nt

UniGene Fasta

>sp_v1.1_unigene76095
CGTCGTGACCTTGGCTGTCACTCACAAGGACAAGTGGAGTCCAGCATTGCAAATTCGAACAGTTTTACTGAGTATACAAGCACTGTTAAGTGCACCAAATCCAGATGACCCTCTTTCTGAAAACATTGCAAAACACTGGAAGACGAATGAAATTGAGGCTGTGGAAACAGCAAAAGAATGGACAAGGCTGTATGCAAGTGGGGCCTGACATTCTACATCGATTCATTCAATAGTACTGTTCTAATGTTGACTAATCAAACACAAGAAGTGATGTTACATGGAAAGGCTACGCAAAAGTTGAAGATATATGCTCTAAGCAGCTTACGGGAAACTATTCATCGAACATTGACTTTTATCAGCCAAATATGCAAGAGGAGGACATCTA

Ace file of the UniGene sp_v1.1_unigene76095

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ubiquitin carrier protein n=5 Tax=Magnoliophyta RepID=C0P584_MAIZE	-	-	2.0e-26	95%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	98%
Blast2go	ubiquitin-conjugating enzyme 1	-	-	4.68983e-27	98%

Source	ECs	Term	Type	e value	Identity
Blast2go	Ubiquitin--protein ligase.	EC:6.3.2.19	-	4.68983e-27	98%

Source	GOs	Term	Type	e value	Identity
Blast2go	ubiquitin-dependent protein catabolic process	GO:0006511	Biological Process	4.68983e-27	98%
Blast2go	protein binding	GO:0005515	Molecular Function	4.68983e-27	98%
Blast2go	ubiquitin-protein ligase activity	GO:0004842	Molecular Function	4.68983e-27	98%
Blast2go	UBC13-MMS2 complex	GO:0031372	Cellular Component	4.68983e-27	98%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NNB1

Fln msg: your sequence is shorter than subject: 69 - 153

Fln protein: VVTLAVTHKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEIEAVETAKEWTRLYASGA*

Protein Length: 70

Fln nts: CGTCGTGACCTTGGCTGTCACTCACAAGGACAAGTGGAGTCCAGCATTGCAAATTCGAACAGTTTTACTGAGTATACAAGCACTGTTAAGTGCACCAAATCCAGATGACCCTCTTTCTGAAAACATTGCAAAACACTGGAAGACGAATGAAATTGAGGCTGTGGAAACAGCAAAAGAATGGACAAGGCTGTATGCAAGTGGGGCCTGA___CATTCTACATCGATTCATTCAATAGTACTGTTCTAATGTTGACTAATCAAACACAAGAAGTGATGTTACATGGAAAGGCTACGCAAAAGTTGAAGATATATGCTCTAAGCAGCTTACGGGAAACTATTCATCGAACATTGACTTTTATCAGCCAAATATGCAAGAGGAGGACATCTA

Fln Alignment:

sp_v1.1_unigene76095___KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEIEAVETAKEWTRLYASGA
A9NNB1_______________KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEVEAVETAKEWTRLYASGA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain