SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene75833

Length: 868 nt

Origin of reads: Biogeco_1 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene75833 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	LEA_2 domain containing protein	-	-	4.0e-11	26%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	protein	-	-	0.0	71%

Full-Lengther Next Prediction

SNPs (tot: 39)

Position	A %	C %	G %	T %	Probability
261		50	50		1.0
393			85	14	0.993533
418	85		14		0.993533
425	14	85			0.993533
429		14		85	0.993533
460		85		14	0.993533
482		14		85	0.993533
493		16		83	0.994512
511	83	16			0.994512
513		16		83	0.994512
605	11		88		0.923564
626	12			87	0.992554
628		37	62		1.0
644	25		75		1.0
668			87	12	0.992554
690	40		60		1.0
707			80	20	0.995493
708	80		20		0.995493
710		80	20		0.995493
713	20		80		0.995493
716	80		20		0.995493
717		20		80	0.995493
718		20		80	0.995493
719	20		20	60	0.992609
721	20			80	0.995493
723		40	60		1.0
725		20	80		0.995493
727		20	80		0.995493
729	20			80	0.995493
731		40	60		1.0
760			50	50	1.0
762		50		50	1.0
767	50		50		1.0
782	50		50		1.0
786		50		50	1.0
788		50		50	1.0
791		50		50	1.0
796	50			50	1.0
797			50	50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain