SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene75797

Length: 883 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene75797

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative DnaJ protein n=1 Tax=Camellia sinensis RepID=Q2L989_CAMSI	-	-	2.0e-27	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%
Blast2go	chaperone protein dnaj chloroplast	-	-	0.0	64%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to stress	GO:0006950	Biological Process	0.0	64%
Blast2go	nucleus	GO:0005634	Cellular Component	0.0	64%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Heat shock protein DnaJ, N-terminal	IPR001623	-	0.0	64%
Blast2go	Heat shock protein DnaJ	IPR003095	-	0.0	64%

Full-Lengther Next Prediction

SNPs (tot: 11)

Position	A %	C %	G %	T %	Probability
72	60	20			0.99255
73		60		40	1.0
74			20	60	0.99255
75		80	20		0.995493
76	40		20	40	1.0
77			20	40	1.0
81		60		40	1.0
117	88	11			0.991528
608		33	66		0.997452
611		33		66	0.997452
631	33	66			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain