SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene75612

Length: 271 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene75612
CGTCGTGACCTTGGCTGTCACTCATTTCAAAGCCAACATTAAGGGAAATGTGTGAGGTTGGCTTTCATCAAATGGTGTTGGATGCAGTCTAAAATAAAGACTGGTGCAATCTCTGAGTACAAAAAGGACATTGAACTGATGTTGAAGGTTGCTCGTGATTACTTGGAAAGCTCTAAGCAAGTTGGTAGTATGGATGCAAATAATGAAGAAATGCAGAAAAACAACAATTCGGAATGAACATCTGGTCATGTATGATGTTTCCATTGCAGTT

Ace file of the UniGene sp_v1.1_unigene75612

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	similar to C2 domain-containing protein / GRAM domain-containing protein	-	-	2.0e-07	56%
FL-Next	tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).	-	-	0.0	59%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D7LWF6

Fln msg: Unexpected stop codon in the beginning of your sequence, Unexpected STOP codon at 3' end. Distance to subject end: 35 aas, your sequence is shorter than subject: 79 - 671

Fln protein: RRDLGCHSFQSQH*GKCVRLAFIKWCWMQSKIKTGAISEYKKDIELMLKVARDYLESSKQVGSMDANNEEMQKNNNSE*

Protein Length: 80

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTCAAAGCCAACATTAAGGGAAATGTGTGAGGTTGGCTTTCATCAAATGGTGTTGGATGCAGTCTAAAATAAAGACTGGTGCAATCTCTGAGTACAAAAAGGACATTGAACTGATGTTGAAGGTTGCTCGTGATTACTTGGAAAGCTCTAAGCAAGTTGGTAGTATGGATGCAAATAATGAAGAAATGCAGAAAAACAACAATTCGGAATGAACATCTGGTCATGTATGATGTTTCCATTGCAGTT

Fln Alignment:

sp_v1.1_unigene75612___VRLAFIKWCWMQSKIKTGAISEYKKDIELMLKVARDYLESSKQVGSM
D7LWF6_______________VGVHFKKWCLMQSKIKAGAIGEYKKDVEVMLEVALSYLKSHSSSSSL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain