SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene75255

Length: 349 nt

UniGene Fasta

>sp_v1.1_unigene75255
CGTCGTGACCTTGGCTGTCACTCAGTGGAGGCGATTTTCAGAGGAGCCATGAAAGGAAAATTGATTGTCAGATGTCCGTTGCCCCCGGAGAGAGTTCCAAAGTTTGAACTACTTTATAAGAATATTTAGCCTATGAATAATGTTGTATGGCTTGGGGATGAAGAGGAGGCTTCGTTACCTTGGCTTTCTTTCGTACTAACTTTATAAATGTTCAAGCAGGGTTTGCCAGTTTCATCCATTATTTTGTCAGAAAGCCTGCATGTCCAGCATACAACAAAGAAAATACCGAGCTATCTGGGTATTTGCAACAACATGATTGGAGATTTGTTCCCTGGGAATATCATGAACG

Ace file of the UniGene sp_v1.1_unigene75255

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DIM1 domain containing protein	-	-	3.0e-06	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	100%
Blast2go	unknown [Picea sitchensis]	-	-	1.64171e-11	100%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NKE1

Fln msg: your sequence is shorter than subject: 43 - 151

Fln protein: RRDLGCHSVEAIFRGAMKGKLIVRCPLPPERVPKFELLYKNI*

Protein Length: 44

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTGGAGGCGATTTTCAGAGGAGCCATGAAAGGAAAATTGATTGTCAGATGTCCGTTGCCCCCGGAGAGAGTTCCAAAGTTTGAACTACTTTATAAGAATATTTAG___CCTATGAATAATGTTGTATGGCTTGGGGATGAAGAGGAGGCTTCGTTACCTTGGCTTTCTTTCGTACTAACTTTATAAATGTTCAAGCAGGGTTTGCCAGTTTCATCCATTATTTTGTCAGAAAGCCTGCATGTCCAGCATACAACAAAGAAAATACCGAGCTATCTGGGTATTTGCAACAACATGATTGGAGATTTGTTCCCTGGGAATATCATGAACG

Fln Alignment:

sp_v1.1_unigene75255___VEAIFRGAMKGKLIVRCPLPPERVPKFELLYKNI
A9NKE1_______________VEAIFRGAMKGKLIVRCPLPPERVPKFELLYKNI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain