SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene75219

Length: 379 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene75219
CGTCGTGACCTTGGCTGTCACTCATCCCTTTTGGATACAGTAAAACCCATCGACTTGGGTCTTGACGAGGCTGCAATTCTGGAAATAGAGCAGCATAGCTTGGAAATAGAGCAACATATGAGCTCCTCGTGTTCTAGAACGGCCAGAAAAAGAAGAGAACGCAAACGTTCAGGATCGGGAGATCGATGGACTCCACCTGTCATATATATCCACATTCATGAATGTAACAACTTTTCGATCGGAGTCTTTTGTTTACCCAGATCAGCAGTGATTCCACTCCACGATCATCGTGGCATGACAGTGCTGAGCAAACTTCTGTATGGTTCAATGCACCTCAAGTCTTATGATTGGATAGACCCAGTATCCAGCATAGCCATGA

Ace file of the UniGene sp_v1.1_unigene75219

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF1637 domain containing protein	-	-	1.0e-33	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	45%
Blast2go	uncharacterized protein	-	-	8.34746e-24	66%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cupin, RmlC-type	IPR011051	-	8.34746e-24	66%
Blast2go	Cysteamine dioxygenase	IPR012864	-	8.34746e-24	66%
Blast2go	RmlC-like jelly roll fold	IPR014710	-	8.34746e-24	66%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A9Y5

Fln msg: Distance to subject end: 113 aas, your sequence is shorter than subject: 126 - 275

Fln protein: RRDLGCHSSLLDTVKPIDLGLDEAAILEIEQHSLEIEQHMSSSCSRTARKRRERKRSGSGDRWTPPVIYIHIHECNNFSIGVFCLPRSAVIPLHDHRGMTVLSKLLYGSMHLKSYDWIDPVSSIAM

Protein Length: 127

Fln nts: CGTCGTGACCTTGGCTGTCACTCATCCCTTTTGGATACAGTAAAACCCATCGACTTGGGTCTTGACGAGGCTGCAATTCTGGAAATAGAGCAGCATAGCTTGGAAATAGAGCAACATATGAGCTCCTCGTGTTCTAGAACGGCCAGAAAAAGAAGAGAACGCAAACGTTCAGGATCGGGAGATCGATGGACTCCACCTGTCATATATATCCACATTCATGAATGTAACAACTTTTCGATCGGAGTCTTTTGTTTACCCAGATCAGCAGTGATTCCACTCCACGATCATCGTGGCATGACAGTGCTGAGCAAACTTCTGTATGGTTCAATGCACCTCAAGTCTTATGATTGGATAGACCCAGTATCCAGCATAGCCATGA

Fln Alignment:

sp_v1.1_unigene75219___SLLDTVKPIDLGLDEAAILEIEQHSLEIEQHMSSXXXXXXXXXXXXXXXXXXXXWTPPVIYIHIHECNNFSIGVFCLPRSAVIPLHDHRGMTVLSKLLYGSMHLKSYDWIDPVSS
D5A9Y5_______________SVLDTIKPVDVGLNEDVFENDHGYGF------------FGPSLWRGRHSRIVARWAAPVTYLHLYECDRFSIGIFCLPASAVIPFHNHPGMTVLSKLLFGSMYIKAYDWVDPINT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain