SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene75113

Length: 309 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene75113
CGTCGTGACCTTGGCTGTCACTCAGTGTCGATTTCAGATATTAATAATCCTTCTTTCTGCTTCGGCCTAAACAACAGCACAGAGAGTGCAATCAGCTAGTGTGCACGCAATTGAAAACTAAAATGGAGTCCAAACAGCAGGTGAGATTGATTGATTCAGGAAACGTAAGGTGGCAGGATCGAATACATGCTCTCGGTCGACTTTTGGCTAGTATTTTGCGACATAGAGCAATTGACTTAGGATTGAGCATGAGAAGTGATGGCTATGTAAGAGTTAATGTATTTGTTGAAGCTAGAGGAAAGGACATAT

Ace file of the UniGene sp_v1.1_unigene75113

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PTS_2-RNA domain containing protein	-	-	1.0e-06	35%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Phosphotransferase KptA/Tpt1	IPR002745	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLX4

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 164 aas, your sequence is shorter than subject: 102 - 574

Fln protein: S*PWLSLSVDFRY**SFFLLRPKQQHRECNQLVCTQLKTKMESKQQVRLIDSGNVRWQDRIHALGRLLASILRHRAIDLGLSMRSDGYVRVNVFVEARGKDI

Protein Length: 103

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTGTCGATTTCAGATATTAATAATCCTTCTTTCTGCTTCGGCCTAAACAACAGCACAGAGAGTGCAATCAGCTAGTGTGCACGCAATTGAAAACTAAAATGGAGTCCAAACAGCAGGTGAGATTGATTGATTCAGGAAACGTAAGGTGGCAGGATCGAATACATGCTCTCGGTCGACTTTTGGCTAGTATTTTGCGACATAGAGCAATTGACTTAGGATTGAGCATGAGAAGTGATGGCTATGTAAGAGTTAATGTATTTGTTGAAGCTAGAGGAAAGGACATAT

Fln Alignment:

sp_v1.1_unigene75113___DRIHALGRLLASILRHRAIDLGLSMRSDGYVRV
B8LLX4_______________DQINALGRSLSSVLRHRADELKLNIRSDGYVAV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain