SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene74683

Length: 252 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene74683
CGTCGTGACCTTGGCTGTCACTCAAGTTTGATGGTGTGCAATGTTTCTTATAATAAACTAGCAGGCCCTCTTCCACAGACAACCCCATTCAAACATATGGATGTAACCAATTTTATGGGAAACAAAGGGCTATGTGGAGGATCTATGTTGAATGCATGTGAAGGTCTGGATGCACAGTCATCCACTTCTTCCCCCATGTTGCCAACGACAAAAACCTCCACAGAGCAAATTGTTGGTATAATTGCTGCAACA

Ace file of the UniGene sp_v1.1_unigene74683

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative LRR receptor-like kinase n=2 Tax=Oryza sativa RepID=Q6YT77_ORYSJ	-	-	3.0e-10	57%
FL-Next	sp=Probable leucine-rich repeat receptor-like protein kinase At2g33170; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	46%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: O49318

Fln msg: Distance to subject end: 367 aas, your sequence is shorter than subject: 84 - 1124

Fln protein: RRDLGCHSSLMVCNVSYNKLAGPLPQTTPFKHMDVTNFMGNKGLCGGSMLNACEGLDAQSSTSSPMLPTTKTSTEQIVGIIAAT

Protein Length: 85

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGTTTGATGGTGTGCAATGTTTCTTATAATAAACTAGCAGGCCCTCTTCCACAGACAACCCCATTCAAACATATGGATGTAACCAATTTTATGGGAAACAAAGGGCTATGTGGAGGATCTATGTTGAATGCATGTGAAGGTCTGGATGCACAGTCATCCACTTCTTCCCCCATGTTGCCAACGACAAAAACCTCCACAGAGCAAATTGTTGGTATAATTGCTGCAACA

Fln Alignment:

sp_v1.1_unigene74683___SSLMVCNVSYNKLAGPLPQTTPFKHMDVTNFMGNKGLCGGSMLNACEGLDAQSSTSSPMLPTTKTST
O49318_______________SSLLGCNFSYNNLTGQLPHTQIFQNMTLTSFLGNKGLCGGH-LRSCD----PSHSSWPHISSLKAGS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain