SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene74588

Length: 371 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene74588
CGTCGTGACCTTGGCTGTCACTCAGTTTTCCATTGCATACTTATCTCTTGAGATTACCTTTTGTGCTGTAAAAAAGTTATGTATATTAGAGGCTAAAATTCATGGCAAGGGGGCTTTTGAACTAGGATGCACTGTGTGTCCAATTGCGATAAAATACGACAAGATCTTTGCAGATGCTTTTTGGAATAGTAAGAAACAGTCTTTTACAATGCATTTGATCCGTCTTATGACCTCATGGGCTGTGGTTTGTGATGTGTGGTACTTGGAGCCACAAACTCTGCAACCTGGCGAGACACCAATTGAATTTGCAGAGAGGGTCAGGGACATAATAAGTACAAGAGCAGGCATAAAGAAGGTTCCATGGGATGGTT

Ace file of the UniGene sp_v1.1_unigene74588

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	1-acyl-sn-glycerol-3-phosphate acyltransferase zeta precursor, putative; K13506 glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]	-	-	3.00018e-42	88%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	phospholipid glycerol acyltransferase family protein	-	-	2.14399e-43	94%

Source	ECs	Term	Type	e value	Identity
AutoFact	Glycerol-3-phosphate O-acyltransferase.	EC:2.3.1.15	-	3.00018e-42	88%

Source	KEGGs	Term	e value	Identity
AutoFact	Glycerolipid metabolism	00561	3.00018e-42	88%
AutoFact	Glycerophospholipid metabolism	00564	3.00018e-42	88%
AutoFact	Metabolic pathways	01100	3.00018e-42	88%

Source	GOs	Term	Type	e value	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	2.14399e-43	94%
Blast2go	transferase activity	GO:0016740	Molecular Function	2.14399e-43	94%
Blast2go	plasma membrane	GO:0005886	Cellular Component	2.14399e-43	94%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	2.14399e-43	94%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NUE0

Fln msg: Distance to subject end: 30 aas, your sequence is shorter than subject: 123 - 371

Fln protein: VVTLAVTQFSIAYLSLEITFCAVKKLCILEAKIHGKGAFELGCTVCPIAIKYDKIFADAFWNSKKQSFTMHLIRLMTSWAVVCDVWYLEPQTLQPGETPIEFAERVRDIISTRAGIKKVPWDG

Protein Length: 124

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTTTTCCATTGCATACTTATCTCTTGAGATTACCTTTTGTGCTGTAAAAAAGTTATGTATATTAGAGGCTAAAATTCATGGCAAGGGGGCTTTTGAACTAGGATGCACTGTGTGTCCAATTGCGATAAAATACGACAAGATCTTTGCAGATGCTTTTTGGAATAGTAAGAAACAGTCTTTTACAATGCATTTGATCCGTCTTATGACCTCATGGGCTGTGGTTTGTGATGTGTGGTACTTGGAGCCACAAACTCTGCAACCTGGCGAGACACCAATTGAATTTGCAGAGAGGGTCAGGGACATAATAAGTACAAGAGCAGGCATAAAGAAGGTTCCATGGGATGGTT

Fln Alignment:

sp_v1.1_unigene74588___KGAFELGCTVCPIAIKYDKIFADAFWNSKKQSFTMHLIRLMTSWAVVCDVWYLEPQTLQPGETPIEFAERVRDIISTRAGIKKVPWDG
A9NUE0_______________KGAFELGCTVCPIAIKYNKIFVDAFWNSKKLSFTMHLVRLMTSWAVVCEVWYLEPQTLQPGETPIEFAERVRDIISMRAGIKKVPWDG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain