SustainPineDB

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Assembly info
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SSRs
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GOs
ECs
KEGGs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene74501

Length: 296 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene74501
CGTCGTGACCTTGGCTGTCACCCATCTTTACGTGTGGCCTACATTGATGAAAGAGAAGAGGGGGAGAATGAGAAATCTAAGGTCTATTATTCTGTCCTTGTCAAAGCAGTTAATGGCGTTGACCAGATAATATACCAAATCAAGCTGCCTGGTAATCCTATTCTTGGTGAGGGGAGCCAGAAAATCAGAACCATGCTATTATTTCACTCGTGGAGAGCTCTTCAAACAATTGATATGAACCAGGATAACTATCTAGAAGAAGCATTCAAAAATGCGGAACTTGCTGGAAGAATTTC

Ace file of the UniGene sp_v1.1_unigene74501

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATGSL04 (glucan synthase-like 4); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups; K11000 callose synthase [EC:2.4.1.-]	-	-	6.0e-20	60%
FL-Next	sp=Putative callose synthase 8; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	60%
Blast2go	glucan synthase like 4	-	-	2.06075e-22	74%

Source	ECs	Term	Type	e value	Identity
AutoFact	Transferases, Glycosyltransferases, Hexosyltransferases.	EC:2.4.1.-	-	6.0e-20	60%

Source	KEGGs	Term	e value	Identity
AutoFact	Fructose and mannose metabolism	00051	6.0e-20	60%
AutoFact	N-Glycan biosynthesis	00510	6.0e-20	60%
AutoFact	Mucin type O-Glycan biosynthesis	00512	6.0e-20	60%
AutoFact	Various types of N-glycan biosynthesis	00513	6.0e-20	60%
AutoFact	Other types of O-glycan biosynthesis	00514	6.0e-20	60%
AutoFact	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	6.0e-20	60%
AutoFact	Glycosaminoglycan biosynthesis - keratan sulfate	00533	6.0e-20	60%
AutoFact	Lipopolysaccharide biosynthesis	00540	6.0e-20	60%
AutoFact	Peptidoglycan biosynthesis	00550	6.0e-20	60%
AutoFact	Glycerolipid metabolism	00561	6.0e-20	60%
AutoFact	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis	00563	6.0e-20	60%
AutoFact	Sphingolipid metabolism	00600	6.0e-20	60%
AutoFact	Glycosphingolipid biosynthesis - lacto and neolacto series	00601	6.0e-20	60%
AutoFact	Glycosphingolipid biosynthesis - globo series	00603	6.0e-20	60%
AutoFact	Glycosphingolipid biosynthesis - ganglio series	00604	6.0e-20	60%
AutoFact	Carotenoid biosynthesis	00906	6.0e-20	60%
AutoFact	Zeatin biosynthesis	00908	6.0e-20	60%
AutoFact	Flavonoid biosynthesis	00941	6.0e-20	60%
AutoFact	Anthocyanin biosynthesis	00942	6.0e-20	60%
AutoFact	Flavone and flavonol biosynthesis	00944	6.0e-20	60%
AutoFact	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	6.0e-20	60%
AutoFact	Betalain biosynthesis	00965	6.0e-20	60%
AutoFact	Biosynthesis of type II polyketide products	01057	6.0e-20	60%
AutoFact	Metabolic pathways	01100	6.0e-20	60%
AutoFact	Biosynthesis of secondary metabolites	01110	6.0e-20	60%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Glycosyl transferase, family 48	IPR003440	-	2.06075e-22	74%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9LUD7

Fln msg: Distance to subject end: 584 aas, your sequence is shorter than subject: 98 - 1976

Fln protein: RRDLGCHPSLRVAYIDEREEGENEKSKVYYSVLVKAVNGVDQIIYQIKLPGNPILGEGSQKIRTMLLFHSWRALQTIDMNQDNYLEEAFKNAELAGRI

Protein Length: 99

Fln nts: CGTCGTGACCTTGGCTGTCACCCATCTTTACGTGTGGCCTACATTGATGAAAGAGAAGAGGGGGAGAATGAGAAATCTAAGGTCTATTATTCTGTCCTTGTCAAAGCAGTTAATGGCGTTGACCAGATAATATACCAAATCAAGCTGCCTGGTAATCCTATTCTTGGTGAGGGGAGCCAGAAAATCAGAACCATGCTATTATTTCACTCGTGGAGAGCTCTTCAAACAATTGATATGAACCAGGATAACTATCTAGAAGAAGCATTCAAAAATGCGGAACTTGCTGGAAGAATTTC

Fln Alignment:

sp_v1.1_unigene74501___HPSLRVAYIDEREEGENE-KSKVYYSVLVKAVNGVDQIIYQIKLPGNPILGEGSQKIRT-MLLFHSWRALQTIDMNQDNYLEEAFKNAEL
Q9LUD7_______________YPSLRVAYVEEREEIVLDVPKKVYYSILVKAVNGFDQEIYRVKLPGPPNIGEGKPENQNHAIVFTRGEALQTIDMNQDHYLEEAFKMRNL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain