SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene74429

Length: 224 nt

UniGene Fasta

>sp_v1.1_unigene74429
CGTCGTGACCTTGGCTGTCACTCAATTTCCTTATGCTCTCGTCATTAACGTTGGAAATTTGATAGAGGTAATGAGTAATGGAAGATACAAAAGCATAGAACATCGGGCAATGACAGACCGTTGCAGGGATAGGCTGTCGATTGGGGTGTTTTATGCTCCTGAACTCGAAGCAGAGATCGGTCCAGCAGAAGAACTGATAGATGAAAGTCATCCATGCTTGTTCA

Ace file of the UniGene sp_v1.1_unigene74429

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ethylene-forming enzyme n=1 Tax=Picea glauca RepID=Q40839_PICGL	-	-	8.0e-23	68%
FL-Next	tr=Ethylene-forming enzyme; Picea glauca (White spruce) (Pinus glauca).	-	-	0.0	68%
Blast2go	acc oxidase	-	-	1.59375e-22	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Oxoglutarate/iron-dependent oxygenase	IPR005123	-	1.59375e-22	75%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q40839

Fln msg: Distance to subject end: 29 aas, your sequence is shorter than subject: 74 - 298

Fln protein: VVTLAVTQFPYALVINVGNLIEVMSNGRYKSIEHRAMTDRCRDRLSIGVFYAPELEAEIGPAEELIDESHPCLF

Protein Length: 75

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTCCTTATGCTCTCGTCATTAACGTTGGAAATTTGATAGAGGTAATGAGTAATGGAAGATACAAAAGCATAGAACATCGGGCAATGACAGACCGTTGCAGGGATAGGCTGTCGATTGGGGTGTTTTATGCTCCTGAACTCGAAGCAGAGATCGGTCCAGCAGAAGAACTGATAGATGAAAGTCATCCATGCTTGTTCA

Fln Alignment:

sp_v1.1_unigene74429___VTLAVTQFPYALVINVGNLIEVMSNGRYKSIEHRAMTDRCRDRLSIGVFYAPELEAEIGPAEELIDESHPCLF
Q40839_______________IWVAVQPIPYALVINIGNLLEVITNGRYKSIQHRAVTNKHKSRLSIDVFYSPGFDAEIGPAPELIDESHPCLF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain