SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene74361

Length: 284 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene74361
CGTCGTGACCTTGGCTGTCACTCACTCAAGGCTGGATTGTCTGTTGCTCGTTTTGATTTCTCTTGGGGAAATAATGTCGTGATCTTGGCTGTCTTTCAAATCTCAAAACGGCTGTGAAGAACACTAAGAAGCTCTGTGCTGTCATGCTGGATACACTGGGTCCGGAGTTGCAGGTTTTCAATAAGAATGGGACACCTATTGAACTGGAGGCTAATGCTTTTGTGACTTTGACCCCAGATTCTAGCAGAGAAGCCTCATCAGAACTTTTACCAATAAACTATCCA

Ace file of the UniGene sp_v1.1_unigene74361

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Pyruvate kinase n=1 Tax=Picea sitchensis RepID=B8LLZ7_PICSI	-	-	6.0e-31	93%
FL-Next	sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	pyruvate kinase	-	-	1.1371e-30	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to cadmium ion	GO:0046686	Biological Process	1.1371e-30	80%
Blast2go	catalytic activity	GO:0003824	Molecular Function	1.1371e-30	80%
Blast2go	plasma membrane	GO:0005886	Cellular Component	1.1371e-30	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Pyruvate kinase	IPR001697	-	1.1371e-30	80%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLZ7

Fln msg: Separated hits, possible frame ERROR between 72 and 93, Distance to subject end: 391 aas, your sequence is shorter than subject: 95 - 527

Fln protein: RRDLGCHSLKAGLSVARFDFSWGxxxxxxxxLSNLKTAVKNTKKLCAVMLDTLGPELQVFNKNGTPIELEANAFVTLTPDSSREASSELLPINYP

Protein Length: 96

Fln nts: CGTCGTGACCTTGGCTGTCACTCACTCAAGGCTGGATTGTCTGTTGCTCGTTTTGATTTCTCTTGGGGAAAxxxxxxxxxxxxxxxxxxxxxTCTTTCAAATCTCAAAACGGCTGTGAAGAACACTAAGAAGCTCTGTGCTGTCATGCTGGATACACTGGGTCCGGAGTTGCAGGTTTTCAATAAGAATGGGACACCTATTGAACTGGAGGCTAATGCTTTTGTGACTTTGACCCCAGATTCTAGCAGAGAAGCCTCATCAGAACTTTTACCAATAAACTATCCA

Fln Alignment:

sp_v1.1_unigene74361___GCHSLKAGLSVARFDFSWGNxxxxxxxLSNLKTAVKNTKKLCAVMLDTLGPELQVFNKNGTPIELEANAFVTLTPDSSREASSELLPINY
B8LLZ7_______________GC--LKAGLSVARFDFSWGNxxxxxxxLENLKNAVKNTKKLCAVMLDTLGPELQVFNKNGAPIELEANAFVTLTPDSSREASSEVLPINY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain