SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene74246

Length: 419 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene74246
CGTCGTGACCTTGGCTGTCACTCAACAATGAGACGCTTTCCTCCTTCAGCACTACCTTCGTTTTTAGCATGGTCCCGCCCCCATCTAACGCAGGCGGGAATGGAATGGCCTTCATCCTCACGCCCTACGCATCTCCAATGGACGCTGTGCCGGCCCAGTATCTGGGCTTGCTTAACAACACCAGCAACGGGAAGCCATACAATCACCTGTTCGCAGTGGAGTTCGATACAACCAGGAATGTGGAATTCAATGACCCCGACGACAACCACGTGGGCGTGGACATCAACAACCTCATATCCGCGCAGACCGAGACTGCCGGCTATTGGAAAGGTGAAGACTTTCAGGAATTGAGCCTCAAGAGCGGACGCAACATACAGGCCTGGATCAATTACGACCATCTCCAAAGCCGGCTCAACGTT

Ace file of the UniGene sp_v1.1_unigene74246

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Lectin-like receptor kinase 7;1 n=1 Tax=Medicago truncatula RepID=Q6UY60_MEDTR	-	-	6.0e-26	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	77%
Blast2go	serine threonine-specific kinase like protein	-	-	0.0	68%

Source	GOs	Term	Type	Identity
Blast2go	binding	GO:0005488	Molecular Function	68%
Blast2go	transferase activity	GO:0016740	Molecular Function	68%
Blast2go	plasma membrane	GO:0005886	Cellular Component	68%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NVC0

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 417 aas, your sequence is shorter than subject: 139 - 636

Fln protein: S*PWLSLNNETLSSFSTTFVFSMVPPPSNAGGNGMAFILTPYASPMDAVPAQYLGLLNNTSNGKPYNHLFAVEFDTTRNVEFNDPDDNHVGVDINNLISAQTETAGYWKGEDFQELSLKSGRNIQAWINYDHLQSRLNV

Protein Length: 140

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACAATGAGACGCTTTCCTCCTTCAGCACTACCTTCGTTTTTAGCATGGTCCCGCCCCCATCTAACGCAGGCGGGAATGGAATGGCCTTCATCCTCACGCCCTACGCATCTCCAATGGACGCTGTGCCGGCCCAGTATCTGGGCTTGCTTAACAACACCAGCAACGGGAAGCCATACAATCACCTGTTCGCAGTGGAGTTCGATACAACCAGGAATGTGGAATTCAATGACCCCGACGACAACCACGTGGGCGTGGACATCAACAACCTCATATCCGCGCAGACCGAGACTGCCGGCTATTGGAAAGGTGAAGACTTTCAGGAATTGAGCCTCAAGAGCGGACGCAACATACAGGCCTGGATCAATTACGACCATCTCCAAAGCCGGCTCAACGTT

Fln Alignment:

sp_v1.1_unigene74246___MVPPPSNAGGNGMAFILTPYASPMDAVPAQYLGLLNNTSNGKPYNHLFAVEFDTTRNVEFNDPDDNHVGVDINNLISAQTETAGYWKGEDFQELSLKSGRNIQAWINYDHLQSRLNV
A9NVC0_______________IVPPPSNAGGNGIAFFMTPHTSSMDAQPSQYLGLLNLTTNGQAYNHLFAVEFDTIMNVEFNDPDGNHVGVDVNNLVSVQTETAGYWNGEEFHELNLRSGRNIQAWIDYDHLQSRLDV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain