SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene74019

Length: 279 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene74019
CGTCGTGACCTTGGCTGTCACTCAATATAGCACCTGACACATTCAGTTAGTAGTGTTTGTTTAATTTCTGCGTCTCTGTTGAGATTGGTCATTCGGGTTGAGCGTGATGGGGTGTGTGGAGATAGCATTCGGCAGCATTGATGATGCGTTCAAGTTTGAAGCGTTGAGGTCATATGTTGCAGAGTTTATCTCCACTCTGCTCTTCGTCTTTGCTGGTGTCGGATCTGTCATGGCTTACGATGAGCTGACCTCGGATGCAACTCTGAGCCCGGCGGGTCT

Ace file of the UniGene sp_v1.1_unigene74019

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Probable aquaporin TIP-type RB7-5A n=5 Tax=lamiids RepID=TIP1_TOBAC	-	-	5.0e-13	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%
Blast2go	mip tip subfamily	-	-	2.9292e-13	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Major intrinsic protein	IPR000425	-	2.9292e-13	82%
Blast2go	Aquaporin-like	IPR023271	-	2.9292e-13	82%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PT26

Fln msg: Distance to subject end: 74 aas, your sequence is shorter than subject: 57 - 131

Fln protein: MGCVEIAFGSIDDAFKFEALRSYVAEFISTLLFVFAGVGSVMAYDELTSDATLSPAG

Protein Length: 58

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATATAGCACCTGACACATTCAGTTAGTAGTGTTTGTTTAATTTCTGCGTCTCTGTTGAGATTGGTCATTCGGGTTGAGCGTG_-_ATGGGGTGTGTGGAGATAGCATTCGGCAGCATTGATGATGCGTTCAAGTTTGAAGCGTTGAGGTCATATGTTGCAGAGTTTATCTCCACTCTGCTCTTCGTCTTTGCTGGTGTCGGATCTGTCATGGCTTACGATGAGCTGACCTCGGATGCAACTCTGAGCCCGGCGGGTCT

Fln Alignment:

sp_v1.1_unigene74019___VEIAFGSIDDAFKFEALRSYVAEFISTLLFVFAGVGSVMAYDELTSDATLSPAG
C0PT26_______________IGVAFGRFDEAFGLDGFKSYLAEFISTLLFVFAGVGSAMAYDKLTSSAALDPAG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain