SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene73774

Length: 284 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene73774
CGTCGTGACCTTGGCTGTCACTCATGAAGGGCATTTCCCCATTAAAAGTTCTGTCGAGCTCAGCAACCATGTATTGGGGGACGCTGGACGATTCGCCTATGTTCCGCAAGCAGGTACAAGCATCAGAGGAAAGTGCAGAGATTTTAAGGGAGCGCTGTCAGAAATTTTACAAAGGATGTAGAAAATATACTGAAGGTCTTGGAGAAGCTTATGATGGAGACATTGCTTTTGCAAGTTCCTTAGAAATGTTTGGAGGGGGCGATGATGACCCTATTAGTATATCT

Ace file of the UniGene sp_v1.1_unigene73774

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	SFC; SFC (SCARFACE); ARF GTPase activator/ phosphoinositide binding	-	-	2.0e-26	79%
FL-Next	sp=ADP-ribosylation factor GTPase-activating protein AGD3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	79%
Blast2go	atp binding	-	-	6.05777e-27	88%

Source	GOs	Term	Type	e value	Identity
Blast2go	phloem or xylem histogenesis	GO:0010087	Biological Process	6.05777e-27	88%
Blast2go	leaf morphogenesis	GO:0009965	Biological Process	6.05777e-27	88%
Blast2go	xylem and phloem pattern formation	GO:0010051	Biological Process	6.05777e-27	88%
Blast2go	response to auxin stimulus	GO:0009733	Biological Process	6.05777e-27	88%
Blast2go	ARF GTPase activator activity	GO:0008060	Molecular Function	6.05777e-27	88%
Blast2go	protein binding	GO:0005515	Molecular Function	6.05777e-27	88%
Blast2go	phosphatidylinositol binding	GO:0035091	Molecular Function	6.05777e-27	88%
Blast2go	cytosol	GO:0005829	Cellular Component	6.05777e-27	88%
Blast2go	trans-Golgi network transport vesicle	GO:0030140	Cellular Component	6.05777e-27	88%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: sp_plants

Fln subject: Q5W7F2

Fln msg: Distance to subject end: 755 aas, your sequence is shorter than subject: 87 - 827

Fln protein: MKGISPLKVLSSSATMYWGTLDDSPMFRKQVQASEESAEILRERCQKFYKGCRKYTEGLGEAYDGDIAFASSLEMFGGGDDDPISIS

Protein Length: 88

Fln nts: CGTCGTGACCTTGGCTGTCACTC_-_ATGAAGGGCATTTCCCCATTAAAAGTTCTGTCGAGCTCAGCAACCATGTATTGGGGGACGCTGGACGATTCGCCTATGTTCCGCAAGCAGGTACAAGCATCAGAGGAAAGTGCAGAGATTTTAAGGGAGCGCTGTCAGAAATTTTACAAAGGATGTAGAAAATATACTGAAGGTCTTGGAGAAGCTTATGATGGAGACATTGCTTTTGCAAGTTCCTTAGAAATGTTTGGAGGGGGCGATGATGACCCTATTAGTATATCT

Fln Alignment:

sp_v1.1_unigene73774___MYWGTLDDSPMFRKQVQASEESAEILRERCQKFYKGCRKYTEGLGEAYDGDIAFASSLEMFGGGDDDPISIS
Q5W7F2_______________MHFTKLDDSPMFRKQLQSMEESAEILRERSLKFYKGCRKYTEGLGEAYDGDIAFASALETFGGGHNDPISVA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain