SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene73734

Length: 502 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene73734
CGTCGTGACCTTGGCTGTCACTCAAAAAGCTTGTTTGTCGGAGGTGCAGTACCCTGCTACAGGAAAGGGACGCGTGAGTTTGGCTGTCAGTCTTTCGATAATAGCACCAGCAATGAAGAGCTCTGCAAAGTTTTTAAGATTTGGAATGTCTTTTCGAGAGTCCAGTCCAGTCCTGATTCTGATTCTGATTCTGATTCTGTTTCTATCCTTGGTAGAATCCTCCAATTTCAACGCGATTTCGAAATCTTATGGGGAACCGTTAGATTGTTGGATAATAACCAAACAGCTCAGCTCACTATGGATCGATCTTCAGGTTCTGGTTTTCAGTCCAAAAATGAATACCTCTTTGGCAGTATGAGCATGAGCATTAAGCTGATCCAAGGGAATTCGGCTGGAACAGTCACTACCTTTTATATGTCATCGGACGAGGCTTCCCACGATGAACTTGACTTCGAATTTCTGGGAGTTGTGCCAGGACAGCCTTCGCAGTGAGTGACAGGCC

Ace file of the UniGene sp_v1.1_unigene73734

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA	-	-	1.0e-24	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	70%
Blast2go	xyloglucan endotransglycosylase	-	-	1.49631e-30	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Glycoside hydrolase, family 16	IPR000757	-	1.49631e-30	77%
Blast2go	Concanavalin A-like lectin/glucanase	IPR008985	-	1.49631e-30	77%
Blast2go	Concanavalin A-like lectin/glucanase, subgroup	IPR013320	-	1.49631e-30	77%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NTM6

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 164 aas, W2: There is no M at the beginning, your sequence is shorter than subject: 164 - 290

Fln protein: RRDLGCHSKSLFVGGAVPCYRKGTREFGCQSFDNSTSNEELCKVFKIWNVFSRVQSSPDSDSDSDSVSILGRILQFQRDFEILWGTVRLLDNNQTAQLTMDRSSGSGFQSKNEYLFGSMSMSIKLIQGNSAGTVTTFYMSSDEASHDELDFEFLGVVPGQPSQ*

Protein Length: 165

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAAAAGCTTGTTTGTCGGAGGTGCAGTACCCTGCTACAGGAAAGGGACGCGTGAGTTTGGCTGTCAGTCTTTCGATAATAGCACCAGCAATGAAGAGCTCTGCAAAGTTTTTAAGATTTGGAATGTCTTTTCGAGAGTCCAGTCCAGTCCTGATTCTGATTCTGATTCTGATTCTGTTTCTATCCTTGGTAGAATCCTCCAATTTCAACGCGATTTCGAAATCTTATGGGGAACCGTTAGATTGTTGGATAATAACCAAACAGCTCAGCTCACTATGGATCGATCTTCAGGTTCTGGTTTTCAGTCCAAAAATGAATACCTCTTTGGCAGTATGAGCATGAGCATTAAGCTGATCCAAGGGAATTCGGCTGGAACAGTCACTACCTTTTATATGTCATCGGACGAGGCTTCCCACGATGAACTTGACTTCGAATTTCTGGGAGTTGTGCCAGGACAGCCTTCGCAGTGAGTGACAGGCC

Fln Alignment:

sp_v1.1_unigene73734___FQRDFEILWGTVRLLDNNQTAQLTMDRSSGSGFQSKNEYLFGSMSMSIKLIQGNSAGTVTTFYMSSDEASHDELDFEFLGVVPGQP
A9NTM6_______________FNNNFEISWGTVRLLNNSQTVQLTMDKASGSGFQSINQYLFGSVSVGIKLVSGNSAGTVTSYYMSSEGSFHDELDFEFLGNLPGKP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain