SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene73317

Length: 289 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene73317
CGTCGTGACCTTGGCTGTCACTCAATCCGGTTGTAGAGAAGGGAAAACTAAAGGAAGAGGAAGCAAAACTATTTTAAGCAGTTGATTAGCCCAGTCGATTTCTACCACAGCCGGGGTTCATATCACTGGAAGTCGAAGAACCAGGTTTTAGACGAAAATGGTGATATGAAGGTCACCGACTTTAGCCTCAATGCTTTGTGGGAGTAGTTCATACAGGACGACCTTCTCCACACAACATACGGTCCATTGCCATATGTTTCACCACAGGTGATTACCAAGAAGAGATATG

Ace file of the UniGene sp_v1.1_unigene73317

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	CIPK16; CBL-interacting protein kinase 16	-	-	3.0e-17	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	64%
Blast2go	cbl-interacting serine threonine-protein	-	-	9.02458e-18	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	basipetal auxin transport	GO:0010540	Biological Process	9.02458e-18	71%
Blast2go	response to water deprivation	GO:0009414	Biological Process	9.02458e-18	71%
Blast2go	hyperosmotic salinity response	GO:0042538	Biological Process	9.02458e-18	71%
Blast2go	multicellular organismal development	GO:0007275	Biological Process	9.02458e-18	71%
Blast2go	transferase activity	GO:0016740	Molecular Function	9.02458e-18	71%
Blast2go	protein binding	GO:0005515	Molecular Function	9.02458e-18	71%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NWA3

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 238 aas, your sequence is shorter than subject: 96 - 426

Fln protein: RRDLGCHSIRL*RREN*RKRKQNYFKQLISPVDFYHSRGSYHWKSKNQVLDENGDMKVTDFSLNALWE*FIQDDLLHTTYGPLPYVSPQVITKKRY

Protein Length: 97

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATCCGGTTGTAGAGAAGGGAAAACTAAAGGAAGAGGAAGCAAAACTATTTTAAGCAGTTGATTAGCCCAGTCGATTTCTACCACAGCCGGGGTTCATATCACTGGAAGTCGAAGAACCAGGTTTTAGACGAAAATGGTGATATGAAGGTCACCGACTTTAGCCTCAATGCTTTGTGGGAGTAGTTCATACAGGACGACCTTCTCCACACAACATACGGTCCATTGCCATATGTTTCACCACAGGTGATTACCAAGAAGAGATATG

Fln Alignment:

sp_v1.1_unigene73317___QNYFKQLISPVDFYHSRGSYH--WKSKNQVLDENGDMKVTDFSLNALWE*FIQDDLLHTTYGPLPYVSPQVITKKRY
A9NWA3_______________RKYFQQLISAVDFCHSRGVYHRDLKPENLLLDENGDMKVSDFGLSALPEQFRQDGLLHTACGTPAYVSPEVITKKGY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain