SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene73130

Length: 391 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene73130
CGTCGTGACCTTGGCTGTCACTCAGAGTGGAAGAAGATTTTATTGGAAGGTGGGTTTAGCCGTTACAACATTATCACCATTCCAGCGCTGCAGTCTGTGATTGAAGCGTTCCCTCGTTGAGCGAGCGCCGTTATGTATGTAAAATTGTTTAGAGTGTTGCAGTCTGTAACGGAAGCGTTCCCTGGTTGAGCACCGCCATGTTTGCATATTTGCAGAATAAGAAATCTTGTTTGATTCGGTATAGATAAATGCTAAATGCCAGAATAAAAGATGTCCGAAATAATGAAGATACTCAATTATCGTTACGGTTAAAAATGTGATGTTAGAAACATGACGTGAATTTGGCAAATAAATTCGTCGTTGCCTTTGACGGCCTCAGTACGTCAAAGGG

Ace file of the UniGene sp_v1.1_unigene73130

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA	-	-	1.0e-08	93%
FL-Next	tr=Caffeic acid O-methyltransferase; Pinus taeda (Loblolly pine).	-	-	0.0	93%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: Q43096

Fln msg: your sequence is shorter than subject: 40 - 381

Fln protein: RRDLGCHSEWKKILLEGGFSRYNIITIPALQSVIEAFPR*

Protein Length: 41

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGAGTGGAAGAAGATTTTATTGGAAGGTGGGTTTAGCCGTTACAACATTATCACCATTCCAGCGCTGCAGTCTGTGATTGAAGCGTTCCCTCGTTGA___GCGAGCGCCGTTATGTATGTAAAATTGTTTAGAGTGTTGCAGTCTGTAACGGAAGCGTTCCCTGGTTGAGCACCGCCATGTTTGCATATTTGCAGAATAAGAAATCTTGTTTGATTCGGTATAGATAAATGCTAAATGCCAGAATAAAAGATGTCCGAAATAATGAAGATACTCAATTATCGTTACGGTTAAAAATGTGATGTTAGAAACATGACGTGAATTTGGCAAATAAATTCGTCGTTGCCTTTGACGGCCTCAGTACGTCAAAGGG

Fln Alignment:

sp_v1.1_unigene73130___EWKKILLEGGFSRYNIITIPALQSVIEAFPR
Q43096_______________EWKRILLEGGFSRYNIIEIPALQSVIEAFPR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain