SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene72548

Length: 360 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene72548
CGTCGTGACCTTGGCTGTCACTCATCTCTTTTCAGTCATCCCAATCTACTTCCTCTTCTTGATCACTCTATTATTGCTGTGAAGGAAGGAACTTGGAACCAAGAAGCTTATTTGCTGTTTCCTGCCTACTTGAATGGGACTTTGCTGGACAATACTGAAAGCATGAAGGCAAAGAACGAGTACTACCCCCCTGGCATAGTTTTTCATATATTTAAACAGTTGTGTGCAGGCTTGAAGCATATGCATAGCTTTGATCCTCCATATGCACATAATGATGTGAAGCCAGGAAATGTTCTGATTAAGTGGAGAAAGAGTCAACCACCACTTGCAGTTTTAATGGACTTTGGCAGTGCTGCTCCT

Ace file of the UniGene sp_v1.1_unigene72548

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	serine/threonine protein kinase, putative (EC:2.7.11.1); K08856 serine/threonine kinase 16 [EC:2.7.11.1]	-	-	9.80909e-45	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%
Blast2go	serine threonine protein kinase	-	-	2.52234e-44	80%

Source	ECs	Term	Type	e value	Identity
AutoFact	Non-specific serine/threonine protein kinase.	EC:2.7.11.1	-	9.80909e-45	73%

Source	GOs	Term	Type	e value	Identity
Blast2go	transferase activity	GO:0016740	Molecular Function	2.52234e-44	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	2.52234e-44	80%
Blast2go	Serine/threonine-protein kinase, active site	IPR008271	-	2.52234e-44	80%
Blast2go	Protein kinase-like domain	IPR011009	-	2.52234e-44	80%
Blast2go	Serine/threonine-protein kinase-like domain	IPR017442	-	2.52234e-44	80%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A7T1

Fln msg: Distance to subject end: 131 aas, your sequence is shorter than subject: 66 - 197

Fln protein: MKAKNEYYPPGIVFHIFKQLCAGLKHMHSFDPPYAHNDVKPGNVLIKWRKSQPPLAVLMDFGSAAP

Protein Length: 67

Fln nts: CGTCGTGACCTTGGCTGTCACTCATCTCTTTTCAGTCATCCCAATCTACTTCCTCTTCTTGATCACTCTATTATTGCTGTGAAGGAAGGAACTTGGAACCAAGAAGCTTATTTGCTGTTTCCTGCCTACTTGAATGGGACTTTGCTGGACAATACTGAAAGC_-_ATGAAGGCAAAGAACGAGTACTACCCCCCTGGCATAGTTTTTCATATATTTAAACAGTTGTGTGCAGGCTTGAAGCATATGCATAGCTTTGATCCTCCATATGCACATAATGATGTGAAGCCAGGAAATGTTCTGATTAAGTGGAGAAAGAGTCAACCACCACTTGCAGTTTTAATGGACTTTGGCAGTGCTGCTCCT

Fln Alignment:

sp_v1.1_unigene72548___MKAKNEYYPPGIVFHIFKQLCAGLKHMHSFDPPYAHNDVKPGNVLIKWRKSQPPLAVLMDFGSAAP
D5A7T1_______________MKAKNEFFTPGIVLHIFKQLCAGLKHMHSFDPPYAHNDVKPGNVLITWRKSQPPLAVLMDFGSAAP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain