SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene72495

Length: 353 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene72495
CGTCGTGACCTTGGCTGTCACTCATTCTCTCTGGAGTAAATTGGAAGGCATTGCTTTTATTTGCCATGTCCAGTGTTGCCCGATCAAATGGTGTGATAAATGCAGGCTTCTTTCTGTTTCAGGCAATGCATCATTTCTATGATGCATTTTTCAAGCAAAATCAGACCTTGGCATCATTCAAAGGAAGCAGATCTTGGTGCAATGCAAGAGTACCTTATCTATATGGCTTTATTCAAAGTCATTACTGGGAAGTTGGCTTCTTACGATATTTCCAGCTGAAACAATTACCAAATTTTCTTATCGCATCACCTATATTGTTGCTTGGAATGGGCGCAATCATTACATATGCAAAG

Ace file of the UniGene sp_v1.1_unigene72495

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Dolichol-p-mannose mannosyltransferase n=2 Tax=Selaginella moellendorffii RepID=D8S7J5_SELML	-	-	8.0e-29	45%
FL-Next	tr=Dolichol-p-mannose mannosyltransferase; Selaginella moellendorffii (Spikemoss).	-	-	0.0	45%
Blast2go	dolichol-p-mannose mannosyltransferase	-	-	1.47184e-28	58%

Source	InterPros	Term	Type	e value	Identity
Blast2go	GPI mannosyltransferase 2-like	IPR007315	-	1.47184e-28	58%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D8S7J5

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 113 aas, your sequence is shorter than subject: 117 - 443

Fln protein: S*PWLSLILSGVNWKALLLFAMSSVARSNGVINAGFFLFQAMHHFYDAFFKQNQTLASFKGSRSWCNARVPYLYGFIQSHYWEVGFLRYFQLKQLPNFLIASPILLLGMGAIITYAK

Protein Length: 118

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTCTCTCTGGAGTAAATTGGAAGGCATTGCTTTTATTTGCCATGTCCAGTGTTGCCCGATCAAATGGTGTGATAAATGCAGGCTTCTTTCTGTTTCAGGCAATGCATCATTTCTATGATGCATTTTTCAAGCAAAATCAGACCTTGGCATCATTCAAAGGAAGCAGATCTTGGTGCAATGCAAGAGTACCTTATCTATATGGCTTTATTCAAAGTCATTACTGGGAAGTTGGCTTCTTACGATATTTCCAGCTGAAACAATTACCAAATTTTCTTATCGCATCACCTATATTGTTGCTTGGAATGGGCGCAATCATTACATATGCAAAG

Fln Alignment:

sp_v1.1_unigene72495___ILSGVNWKALLLFAMSSVARSNGVINAGFFLFQAMHHFYD--AFFKQNQTLASF----------------------------------KGSRSWCNARVPYLYGFIQSHYWEVGFLRYFQLKQLPNFLIASPILLLGMGAIITYAK
D8S7J5_______________LVSGARWKSAILFGFSSIARSNGIVHAGFFLFQCLHLVYHNKVFHMKRPLLAGSLFVIIQCGLQASLVVAPFVVFQAYGYFEMCFNDSKQQRPWCKATIPYLYGFVQDHYWDVGFLRYFQLKQIPNFLSASPALLLASSAIVTYAR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain