SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene71911

Length: 391 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene71911
CGTCGTGACCTTGGCTGTCACTCAATTTATTGTGAAGCCCAGTGCAGAGAATTGGCCGGAGCAGGTTTTGACCTTGGGTGTGATCATTCATGCGAGGAGACTTATGGATTTATGCCCTGCACTGCTTCTGCCATTGGGAATTTGTTCTTGATGGCCGTCTATGGATACCTGTTGTTCTTGTCGGCAACTTATATGTCCGAAGGCAGTGAAATTCTGTTGTCTGTGATGGGATCTGGTATCATCGGAGGCTTATTTCTGCCAATTCTTGGAGCTTTTCCAGATTCTTTGCTTATTCTTGTGTCTGGTCTATCTGGAGTAAGACAACTGCGCAATCACAAGTGCTGATTGGAATGGGGTTGCTTGCTGGTTCAACTGTAATGTTATTGACAGC

Ace file of the UniGene sp_v1.1_unigene71911

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Calcium ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9S836_RICCO	-	-	6.0e-20	46%
FL-Next	tr=Calcium ion binding protein, putative; Ricinus communis (Castor bean).	-	-	0.0	64%
Blast2go	calcium ion binding	-	-	1.10927e-19	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	plant-type vacuole	GO:0000325	Cellular Component	1.10927e-19	84%
Blast2go	plasma membrane	GO:0005886	Cellular Component	1.10927e-19	84%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	1.10927e-19	84%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9S836

Fln msg: Separated hits, possible frame ERROR between 282 and 315, Distance to subject end: 385 aas, your sequence is shorter than subject: 130 - 543

Fln protein: RRDLGCHSIYCEAQCRELAGAGFDLGCDHSCEETYGFMPCTASAIGNLFLMAVYGYLLFLSATYMSEGSEILLSVMGSGIIGGLFLPILGAFPxxxxxxxxxxxxSKTTAQSQVLIGMGLLAGSTVMLLT

Protein Length: 131

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTATTGTGAAGCCCAGTGCAGAGAATTGGCCGGAGCAGGTTTTGACCTTGGGTGTGATCATTCATGCGAGGAGACTTATGGATTTATGCCCTGCACTGCTTCTGCCATTGGGAATTTGTTCTTGATGGCCGTCTATGGATACCTGTTGTTCTTGTCGGCAACTTATATGTCCGAAGGCAGTGAAATTCTGTTGTCTGTGATGGGATCTGGTATCATCGGAGGCTTATTTCTGCCAATTCTTGGAGCTTTTCCAGAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGTAAGACAACTGCGCAATCACAAGTGCTGATTGGAATGGGGTTGCTTGCTGGTTCAACTGTAATGTTATTGACAGC

Fln Alignment:

sp_v1.1_unigene71911___DHSCEETYGFMPCTASAIGNLFLMAVYGYLLFLSATYMSEGSEILLSVMXXXXXXXXXXXXXXAFPDxxxxxxxxxxxSKTTAQSQVLIGMGLLAGSTVMLLT
B9S836_______________EETCEQSYGFLPCTTTALGNMFLIIVYGYLMFIAATYLSNGSELLLEILGPGIVGGLFLPILGALPDxxxxxxxxxxxSKETAQSQVSVGMGLLAGSTVMLLT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain