SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene71827

Length: 252 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene71827
CGTCGTGACCTTGGCTGTCACTCAACGTTTATAAAATTATCTTATTTCCTTGCATAAAGTCTATAGCTTGCAGTTTATGTTTCTGTTGAACTTTGGAAGTATATGTTCGGTATGTTTTTTTAATCACGATGAATATTTCATGGTGTATTATGCAGTTTCCGCTTCTGTATCAGGAAGGACTACAAAATATCCTGTTCCGTTGGGCTCGGATTTTTGGCTGGATGTTTAATGGGATTTGTAGTTCTACCATTA

Ace file of the UniGene sp_v1.1_unigene71827

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	aminophospholipid ATPase; K01530 phospholipid-translocating ATPase [EC:3.6.3.1]	-	-	1.0e-07	50%
FL-Next	sp=Putative phospholipid-transporting ATPase 9; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	51%

Source	ECs	Term	Type	e value	Identity
AutoFact	Phospholipid-translocating ATPase.	EC:3.6.3.1	-	1.0e-07	50%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9SX33

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 177 aas, your sequence is shorter than subject: 83 - 1200

Fln protein: S*PWLSLNVYKIILFPCIKSIACSLCFC*TLEVYVRYVFLITMNISWCIMQFPLLYQEGLQNILFRWARIFGWMFNGICSSTI

Protein Length: 84

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACGTTTATAAAATTATCTTATTTCCTTGCATAAAGTCTATAGCTTGCAGTTTATGTTTCTGTTGAACTTTGGAAGTATATGTTCGGTATGTTTTTTTAATCACGATGAATATTTCATGGTGTATTATGCAGTTTCCGCTTCTGTATCAGGAAGGACTACAAAATATCCTGTTCCGTTGGGCTCGGATTTTTGGCTGGATGTTTAATGGGATTTGTAGTTCTACCATTA

Fln Alignment:

sp_v1.1_unigene71827___TLEVYVRYVFLITMNISWCIMQFPLLYQEGLQNILFRWARIFGWMFNGICSSTI
Q9SX33_______________SLPVIALGVFDQDVSARYCL-KFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain