SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene71299

Length: 250 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene71299
CGTCGTGACCTTGGCTGTCACTCAATGGATGAAAAATTCCTTTTATTTGTGGAAGCAACAATGTGAGAATGCACAAAATGCAGATACTACTGACAGACTTATGAAGGAATTAGTGAATTCTGTTTTATGGGATGATGTTGCAAAGCTCTGGGATGCCCCTGTTCAACCTAATCTGGGTTCAGATTGGAAAACATGGAAACGAGAATGCATGAAATGGTTTTCAATATCTAATCCTTTACCAGTACCTGGA

Ace file of the UniGene sp_v1.1_unigene71299

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	set domain protein, putative (EC:2.1.1.43)	-	-	9.0e-20	51%
FL-Next	sp=Histone-lysine N-methyltransferase SUVR5; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	50%
Blast2go	set domain	-	-	1.59945e-19	72%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: O64827

Fln msg: Distance to subject end: 1084 aas, your sequence is shorter than subject: 83 - 1382

Fln protein: VVTLAVTQWMKNSFYLWKQQCENAQNADTTDRLMKELVNSVLWDDVAKLWDAPVQPNLGSDWKTWKRECMKWFSISNPLPVPG

Protein Length: 84

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATGGATGAAAAATTCCTTTTATTTGTGGAAGCAACAATGTGAGAATGCACAAAATGCAGATACTACTGACAGACTTATGAAGGAATTAGTGAATTCTGTTTTATGGGATGATGTTGCAAAGCTCTGGGATGCCCCTGTTCAACCTAATCTGGGTTCAGATTGGAAAACATGGAAACGAGAATGCATGAAATGGTTTTCAATATCTAATCCTTTACCAGTACCTGGA

Fln Alignment:

sp_v1.1_unigene71299___WMKNSFYLWKQQCENAQNADTTDRLMKELVNSVLWDDVAKLWDAPVQPNLGSDWKTWKRECMKWFSIS
O64827_______________WLENSFPLWVQKCNNAVNAESIELLNEEFDNCIKWNEVKSLSESPMQPMLLSEWKTWKHDIAKWFSIS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain