SustainPineDB

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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene70789

Length: 364 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene70789
CGTCGTGACCTTGGCTGTCACTCAATTTTTGGATTTCAGGTGCTTCGTACTTGGTTGTTACCCACCGGAACATTGGAGACTGGCTCTACTAACAAGCGCACTTCATTGAGTTTTTCCACTGCTTCTGCAAACAAGCCACGGGGAGGTCTTCCTCGCTTCTATTCCGAGGTTCTCCCTACTGGAAAGGACAAAATTGTGCGCATAGAGGGTGATGAGTTTTGGCACATGACAAAAGCATTGCGCTTAGGTGTTCAAGATAGGTACTTTGAAAGGAGGTCGAGCTGATTGGCTTATAGAGAAATGTACAGAACTGGGGGCAAGCAGCGTTACACCGTTGCTGACAGAGAGATCGACTTTGATCAGT

Ace file of the UniGene sp_v1.1_unigene70789

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	methyltransferase; K09761 ribosomal RNA small subunit methyltransferase E [EC:2.1.1.-]	-	-	6.0e-11	94%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	87%
Blast2go	unknown [Picea sitchensis]	-	-	1.40032e-31	79%

Source	ECs	Term	Type	e value	Identity
AutoFact	Transferases, Transferring one-carbon groups, Methyltransferases.	EC:2.1.1.-	-	6.0e-11	94%

Source	KEGGs	Term	e value	Identity
AutoFact	Ubiquinone and other terpenoid-quinone biosynthesis	00130	6.0e-11	94%
AutoFact	Tetracycline biosynthesis	00253	6.0e-11	94%
AutoFact	Histidine metabolism	00340	6.0e-11	94%
AutoFact	Tyrosine metabolism	00350	6.0e-11	94%
AutoFact	Phenylalanine metabolism	00360	6.0e-11	94%
AutoFact	Tryptophan metabolism	00380	6.0e-11	94%
AutoFact	Benzoxazinoid biosynthesis	00402	6.0e-11	94%
AutoFact	Selenocompound metabolism	00450	6.0e-11	94%
AutoFact	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	6.0e-11	94%
AutoFact	Polycyclic aromatic hydrocarbon degradation	00624	6.0e-11	94%
AutoFact	Methane metabolism	00680	6.0e-11	94%
AutoFact	Porphyrin and chlorophyll metabolism	00860	6.0e-11	94%
AutoFact	Carotenoid biosynthesis	00906	6.0e-11	94%
AutoFact	Phenylpropanoid biosynthesis	00940	6.0e-11	94%
AutoFact	Flavonoid biosynthesis	00941	6.0e-11	94%
AutoFact	Anthocyanin biosynthesis	00942	6.0e-11	94%
AutoFact	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	6.0e-11	94%
AutoFact	Isoquinoline alkaloid biosynthesis	00950	6.0e-11	94%
AutoFact	Insect hormone biosynthesis	00981	6.0e-11	94%
AutoFact	Biosynthesis of type II polyketide products	01057	6.0e-11	94%
AutoFact	Biosynthesis of alkaloids derived from shikimate pathway	01063	6.0e-11	94%
AutoFact	Metabolic pathways	01100	6.0e-11	94%
AutoFact	Biosynthesis of secondary metabolites	01110	6.0e-11	94%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NTD9

Fln msg: Warning!, your query overlaps and the subject is separated, Distance to subject end: 125 aas, atg_distance in limit (1-15): atg_distance = 8, W2: There is no M at the beginning, your sequence is shorter than subject: 122 - 301

Fln protein: RRDLGCHSIFGFQVLRTWLLPTGTLETGSTNKRTSLSFSTASANKPRGGLPRFYSEVLPTGKDKIVRIEGDEFWHMTKALRLGVQDxxTLKGGRADWLIEKCTELGASSVTPLLTERSTLIS

Protein Length: 123

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTTTGGATTTCAGGTGCTTCGTACTTGGTTGTTACCCACCGGAACATTGGAGACTGGCTCTACTAACAAGCGCACTTCATTGAGTTTTTCCACTGCTTCTGCAAACAAGCCACGGGGAGGTCTTCCTCGCTTCTATTCCGAGGTTCTCCCTACTGGAAAGGACAAAATTGTGCGCATAGAGGGTGATGAGTTTTGGCACATGACAAAAGCATTGCGCTTAGGTGTTCAAGATxxxxxxACTTTGAAAGGAGGTCGAGCTGATTGGCTTATAGAGAAATGTACAGAACTGGGGGCAAGCAGCGTTACACCGTTGCTGACAGAGAGATCGACTTTGATCAGT

Fln Alignment:

sp_v1.1_unigene70789___SIFGFQVLRTWLLPTGTLETGSTNKRTSLSFSTASANKPRGGLPRFYSEVLPTGKDKIVRIEGDEFWHMTKALRLGVQDRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTLKGGRADWLIEKCTELGASSVTPLLTERSTLIS
A9NTD9_______________NIFGLQVLSKKLLPTGTLEIGSTYKPTSSSFSTASANKPRGGLPRFYSEVLPAGKDKIVRIEGDEFWHMTKALRLGVQDRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTLKGGRADWLIEKCTELGASSVTPLLTERSTLIS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain