SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene69185

Length: 456 nt

UniGene Fasta

>sp_v1.1_unigene69185
ATGGGGCAAAGGGGTTTTGCTTGAAGCTGCACCAAACGAGGTCTTCTATTCATTTCACAAAGATGAGATATCAGCTGCCTCATTGCTTCATCCATGTAAAGTTGCATTTCTCGTGATTGGCGTTGCTCTTCCTTCAGGCATATCTTCGTTTGTGTGTAGGAGAGTTTATGACACTACGAACAGGTGTTTATGGTGGTTAACTGATCAAGACTACACTGATGGGCGTTTATTTTGGAGGAGTATTGTTGCCCTCAATGACTTGAGAATCAGCCTATGAGCAGCCTCTGATGGTCAAAAGTTCAAATGTGTCTATGATGCAGTGCAAGTATAGAACACTTCCAAAGTTATTTGGACTCAAGGATCGAGGTTTCACAAAGAGGATTAACTTGATGAATATTTTGATATTCATATTATTGACAAAAGACGTTACAATTAGAATCATATCTATTGATGCCG

Ace file of the UniGene sp_v1.1_unigene69185

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB66_RICCO	-	-	2.0e-31	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%
Blast2go	dna binding	-	-	4.08561e-31	85%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Bromo adjacent homology (BAH) domain	IPR001025	-	4.08561e-31	85%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P1G4

Fln msg: your sequence is shorter than subject: 92 - 152

Fln protein: WGKGVLLEAAPNEVFYSFHKDEISAASLLHPCKVAFLVIGVALPSGISSFVCRRVYDTTNRCLWWLTDQDYTDGRLFWRSIVALNDLRISL*

Protein Length: 93

Fln nts: ATGGGGCAAAGGGGTTTTGCTTGAAGCTGCACCAAACGAGGTCTTCTATTCATTTCACAAAGATGAGATATCAGCTGCCTCATTGCTTCATCCATGTAAAGTTGCATTTCTCGTGATTGGCGTTGCTCTTCCTTCAGGCATATCTTCGTTTGTGTGTAGGAGAGTTTATGACACTACGAACAGGTGTTTATGGTGGTTAACTGATCAAGACTACACTGATGGGCGTTTATTTTGGAGGAGTATTGTTGCCCTCAATGACTTGAGAATCAGCCTATGA___GCAGCCTCTGATGGTCAAAAGTTCAAATGTGTCTATGATGCAGTGCAAGTATAGAACACTTCCAAAGTTATTTGGACTCAAGGATCGAGGTTTCACAAAGAGGATTAACTTGATGAATATTTTGATATTCATATTATTGACAAAAGACGTTACAATTAGAATCATATCTATTGATGCCG

Fln Alignment:

sp_v1.1_unigene69185___GKGVLLEAAP-NEVFYSFHKDEISAASLLHPCKVAFLVIGVALPSGISSFVCRRVYDTTNRCLWWLTDQDYTD
A9P1G4_______________GKGASIEALPPNEVFYSFHQDEISGASLLHPCKIAFLSKGVQLPSGVSAFVCRRVYDVTSKCLWWLTDRDYTN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain