SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene69010

Length: 439 nt

Origin of reads: Biogeco_1

UniGene Fasta

>sp_v1.1_unigene69010
GTGACACTCGTGGTTACAAGGCGGAAAATGCCCGCGGAGAAAAAGCTTCGTGTATATCATGTTATATGAAAGAGAATCCTGGATTAACAGAGGAAGAGGCTGTCGATCATATCCATGGCATGGTCGATGAGTTAATCAAAGAATTAAGTTGGGAGCTTCTCAAACCAGATAGCAATGTTCCCATCTCTTCCAAGAAACATGCCTTTGACATCACCAGAGCTATCCATCATGGCTACAAATACCGAGATGGCTACAGCGTCACCACATACGAAATGAAGAATTTGGTTATGATAACAGTCCTCGAGCCCGTGCCTATGTAACCACACTTCATAATTAACTGATAACTCTATGCCGTTTCTTGCCCGACTGTATTGTCCATGAGACATACATAACGCGTTGTTTCTAGACACAGTAATTCAATTTCTCCTTAAGTCATAAT

Ace file of the UniGene sp_v1.1_unigene69010

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	(+)-3-carene synthase n=1 Tax=Picea abies RepID=Q84SM8_PICAB	-	-	3.0e-39	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	80%
Blast2go	3-carene synthase	-	-	3.22299e-44	87%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Terpene synthase, metal-binding domain	IPR005630	-	3.22299e-44	87%
Blast2go	Terpenoid synthase	IPR008949	-	3.22299e-44	87%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PRP7

Fln msg: your sequence is shorter than subject: 106 - 366

Fln protein: DTRGYKAENARGEKASCISCYMKENPGLTEEEAVDHIHGMVDELIKELSWELLKPDSNVPISSKKHAFDITRAIHHGYKYRDGYSVTTYEMKNLVMITVLEPVPM*

Protein Length: 107

Fln nts: GTGACACTCGTGGTTACAAGGCGGAAAATGCCCGCGGAGAAAAAGCTTCGTGTATATCATGTTATATGAAAGAGAATCCTGGATTAACAGAGGAAGAGGCTGTCGATCATATCCATGGCATGGTCGATGAGTTAATCAAAGAATTAAGTTGGGAGCTTCTCAAACCAGATAGCAATGTTCCCATCTCTTCCAAGAAACATGCCTTTGACATCACCAGAGCTATCCATCATGGCTACAAATACCGAGATGGCTACAGCGTCACCACATACGAAATGAAGAATTTGGTTATGATAACAGTCCTCGAGCCCGTGCCTATGTAA___CCACACTTCATAATTAACTGATAACTCTATGCCGTTTCTTGCCCGACTGTATTGTCCATGAGACATACATAACGCGTTGTTTCTAGACACAGTAATTCAATTTCTCCTTAAGTCATAAT

Fln Alignment:

sp_v1.1_unigene69010___DTRGYKAENARGEKASCISCYMKENPGLTEEEAVDHIHGMVDELIKELSWELLKPDSNVPISSKKHAFDITRAIHHGYKYRDGYSVTTYEMKNLVMITVLEPVPM
C0PRP7_______________DTRCYKADEERGEEASCISCYRKDNPGLTEEDVVNHIHAMVSDLIKELNWELLRPDSNVPISSKKHAFDITRAIHHGYKHRDGYSIANNEMKNLVMIIVLEPVPM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain