SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene69008

Length: 320 nt

UniGene Fasta

>sp_v1.1_unigene69008
GATTCTGGCACGCAATTCACATTCATTCTGGGGGAGGCATATACGCCACTCAAACAGGAGTTCATGCTGCAGAACCGCGGCGTCCTCATGAACGCCATGGGTGGGGATTTTGTGTTCCAAGGAGCTATGGATCTCTGCTACCAGCAACCTGCTAACGCGCCATTCCCGCAGACGCTGAGCCCGGTGACTCTTCTGTTCGATTCTGCAGACATTACGCTGGATGGTCATCAGCTGCTCTATCAAATACCCGACAGTAGCGCCGCTGGCAATAATGTTACAAAAGGCAATGTAATCTACTGTTTCACATTCGGAAATTCGGA

Ace file of the UniGene sp_v1.1_unigene69008

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Aspartic proteinase nepenthesin-1, putative n=1 Tax=Ricinus communis RepID=B9T009_RICCO	-	-	2.0e-20	48%
FL-Next	tr=Aspartic proteinase nepenthesin-1, putative; Ricinus communis (Castor bean).	-	-	0.0	48%
Blast2go	aspartyl protease family protein	-	-	3.31108e-20	60%

Source	ECs	Term	Type	e value	Identity
Blast2go	Glutathione gamma-glutamylcysteinyltransferase.	EC:2.3.2.15	-	3.31108e-20	60%

Source	GOs	Term	Type	e value	Identity
Blast2go	programmed cell death	GO:0012501	Biological Process	3.31108e-20	60%
Blast2go	defense response by callose deposition in cell wall	GO:0052544	Biological Process	3.31108e-20	60%
Blast2go	defense response to bacterium	GO:0042742	Biological Process	3.31108e-20	60%
Blast2go	phytochelatin biosynthetic process	GO:0046938	Biological Process	3.31108e-20	60%
Blast2go	response to arsenic-containing substance	GO:0046685	Biological Process	3.31108e-20	60%
Blast2go	indole glucosinolate catabolic process	GO:0042344	Biological Process	3.31108e-20	60%
Blast2go	response to cadmium ion	GO:0046686	Biological Process	3.31108e-20	60%
Blast2go	peptidase activity	GO:0008233	Molecular Function	3.31108e-20	60%
Blast2go	copper ion binding	GO:0005507	Molecular Function	3.31108e-20	60%
Blast2go	glutathione gamma-glutamylcysteinyltransferase activity	GO:0016756	Molecular Function	3.31108e-20	60%
Blast2go	cadmium ion binding	GO:0046870	Molecular Function	3.31108e-20	60%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	3.31108e-20	60%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Peptidase aspartic, catalytic	IPR009007	-	3.31108e-20	60%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9T009

Fln msg: Distance to subject end: 46 aas, your sequence is shorter than subject: 106 - 442

Fln protein: DSGTQFTFILGEAYTPLKQEFMLQNRGVLMNAMGGDFVFQGAMDLCYQQPANAPFPQTLSPVTLLFDSADITLDGHQLLYQIPDSSAAGNNVTKGNVIYCFTFGNS

Protein Length: 107

Fln nts: GATTCTGGCACGCAATTCACATTCATTCTGGGGGAGGCATATACGCCACTCAAACAGGAGTTCATGCTGCAGAACCGCGGCGTCCTCATGAACGCCATGGGTGGGGATTTTGTGTTCCAAGGAGCTATGGATCTCTGCTACCAGCAACCTGCTAACGCGCCATTCCCGCAGACGCTGAGCCCGGTGACTCTTCTGTTCGATTCTGCAGACATTACGCTGGATGGTCATCAGCTGCTCTATCAAATACCCGACAGTAGCGCCGCTGGCAATAATGTTACAAAAGGCAATGTAATCTACTGTTTCACATTCGGAAATTCGGA

Fln Alignment:

sp_v1.1_unigene69008___DSGTQFTFILGEAYTPLKQEFMLQNRGVLMNAMGGDFVFQGAMDLCYQQPANAPFPQTLSPVTLLFDSADITLDGHQLLYQIPDSSAAGNNVTKGNVIYCFTFGNS
B9T009_______________DSGTQFTFLLGPVYTALKNEFLSQTRGILKVLNDDNFVFQGAMDLCYLLDSSRPNLQNLPVVSLMFQGAEMSVSGERLLYRVP------GEVRGRDSVWCFTFGNS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain