SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene67935

Length: 459 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene67935
CGTCGTGACCTTGGCTGTCACTCAGTTTTCCTTTGGTTGTCTGGACGGAGTGGCGCTCGTATGCATGTAATGACGCTTCTGCCAAGGCCGAAGGAGATACTTTCTGGCCATATTTTACGCTCTTGATGAGTGATCTAATCGCGAATGCGCCTGAGACAGGCTTCAACACTTCCTCTTATGGCGAAAGCCCCAACATAATTTATGGCCTCCTGCAGTGCTGGGGGAGTATATCGCAGAAAGACTGCTTAATCTGTTCACAGCAAGCACTTGACGCTGTTATGCAACTCTGCGGTAGTAGCACAGGTGGTCGAGTATGGCTTGCTAACTGTTTCCTGCGATACGACAACTCTAGCTTCTTCGCAAAGCTAGACGCACATGGTCCTATCCTGGAGAATGTAAACGATATCACCACAAATCATCTAAAGAATTTAGCAAACGCTTCGCAGTGAGTGACAGGCC

Ace file of the UniGene sp_v1.1_unigene67935

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Serine/threonine kinase-like protein n=3 Tax=Andropogoneae RepID=B6SUE5_MAIZE	-	-	2.0e-13	41%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	59%
Blast2go	33 kda secretory expressed	-	-	3.43552e-38	56%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Gnk2-homologous domain	IPR002902	-	3.43552e-38	56%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLG0

Fln msg: Unexpected stop codon in the beginning of your sequence, Unexpected STOP codon at 3' end. Distance to subject end: 208 aas, your sequence is shorter than subject: 149 - 384

Fln protein: S*PWLSLSFPLVVWTEWRSYACNDASAKAEGDTFWPYFTLLMSDLIANAPETGFNTSSYGESPNIIYGLLQCWGSISQKDCLICSQQALDAVMQLCGSSTGGRVWLANCFLRYDNSSFFAKLDAHGPILENVNDITTNHLKNLANASQ*

Protein Length: 150

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTTTTCCTTTGGTTGTCTGGACGGAGTGGCGCTCGTATGCATGTAATGACGCTTCTGCCAAGGCCGAAGGAGATACTTTCTGGCCATATTTTACGCTCTTGATGAGTGATCTAATCGCGAATGCGCCTGAGACAGGCTTCAACACTTCCTCTTATGGCGAAAGCCCCAACATAATTTATGGCCTCCTGCAGTGCTGGGGGAGTATATCGCAGAAAGACTGCTTAATCTGTTCACAGCAAGCACTTGACGCTGTTATGCAACTCTGCGGTAGTAGCACAGGTGGTCGAGTATGGCTTGCTAACTGTTTCCTGCGATACGACAACTCTAGCTTCTTCGCAAAGCTAGACGCACATGGTCCTATCCTGGAGAATGTAAACGATATCACCACAAATCATCTAAAGAATTTAGCAAACGCTTCGCAGTGAGTGACAGGCC

Fln Alignment:

sp_v1.1_unigene67935___SFPLVVWTEWRSYACNDASAKAEGDTFWPYFTLLMSDLIANAPETGFNTSSYGESPNIIYGLLQCWGS-ISQKDCLICSQQALDAVMQLCGSSTGGRVWLANCFLRYDNSSFFAKLDAHGPILENVNDITTNHLKN
B8LLG0_______________TFPSVI-SELRLHACNNASSYADGSTFSSNLNRVMGDLVKNAPQTGFNTSFYGESSNRVYGLLQCIGNNISQKDCSICSQRARDNVRQLCGNDIGGQEWRNNCFLRYENYSFFSKLDTDGDELENANDIVTTNLSN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain