SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene67881

Length: 400 nt

Origin of reads: Biogeco_1

UniGene Fasta

>sp_v1.1_unigene67881
AGTCAAGCAATATATTACTTTTTGATTGTATTTGGCACGGTGGGGATTGCTGATTTTGATGTATCAACCAAGCACCTGACATGGCAGCACGGCTTCATTCCACTCGTGTGCTTGGAACTTTTGGCTACCATGCTCCAGAATATGCTATGACAGGACAACTAAGTCAAAAGAGTGATGTTTATAGTTTTGGAGTTGTCCTCCTGGAGTTGTTAACTGGCAGAAAGCCAGTTGATCATACAATGCCGCGTGGTCAACAGAGCCTTGTGACATGGGCAACTCCAAGACTTAGTGAAGACAAAGTTAAGCAATGTGTTGATTCAAGATTGAAAAGTGACTATCCACCTAAAGCTGTGGCTAAGATGGCTGCAGTTGCTGCCTTGTGTGTGCAGTATGAAGCTGA

Ace file of the UniGene sp_v1.1_unigene67881

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Pti1d; Pti1-like kinase-like	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	pto kinase interactor 1	-	-	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein kinase activity	GO:0004672	Molecular Function	0.0	89%

Source	InterPros	Term	Type	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	89%
Blast2go	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	89%
Blast2go	Protein kinase-like domain	IPR011009	-	89%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5ACW2

Fln msg: Distance to subject end: 27 aas, your sequence is shorter than subject: 132 - 360

Fln protein: SSNILLFDCIWHGGDC*F*CINQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDSRLKSDYPPKAVAKMAAVAALCVQYEA

Protein Length: 133

Fln nts: AGTCAAGCAATATATTACTTTTTGATTGTATTTGGCACGGTGGGGATTGCTGATTTTGATGTATCAACCAAGCACCTGACATGGCAGCACGGCTTCATTCCACTCGTGTGCTTGGAACTTTTGGCTACCATGCTCCAGAATATGCTATGACAGGACAACTAAGTCAAAAGAGTGATGTTTATAGTTTTGGAGTTGTCCTCCTGGAGTTGTTAACTGGCAGAAAGCCAGTTGATCATACAATGCCGCGTGGTCAACAGAGCCTTGTGACATGGGCAACTCCAAGACTTAGTGAAGACAAAGTTAAGCAATGTGTTGATTCAAGATTGAAAAGTGACTATCCACCTAAAGCTGTGGCTAAGATGGCTGCAGTTGCTGCCTTGTGTGTGCAGTATGAAGCTGA

Fln Alignment:

sp_v1.1_unigene67881___SSNILLFD-CIWHGGDC*F*CINQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDSRLKSDYPPXXXXXXXXXXXLCVQYEA
D5ACW2_______________SSNILLFDDCTAKIAD--FDVSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDSRLKGDYPPKAVAKMAAVAALCVQYEA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain