SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene66966

Length: 293 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene66966
CGTCGTGACCTTGGCTGTCACTCAACGCCCCCGCGTTGCTCATCCAAGATAACGGGGGCGGAATGGACCCCGCCGGCCTGCGCCGTTGCGTGGGTCTCGGCTTCTCCTCCAAAGACGCGGCAAACTCGGTGGGCGCTACGGCAACGGTTTCAAGACATCCACAATGCGGTTGGCTACGGACGCCATTGTCTTCACTCGCACTCTCCCGCCCTACGGTTCGCTCCCCAAGCTCAGCGTAGCGTTGCTCTCACAGACATTCTTAATCAAAACGTCTTCGCAGTGAGTGACAGGCC

Ace file of the UniGene sp_v1.1_unigene66966

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP-binding region, ATPase-like domain-containing protein	-	-	3.0e-15	62%
FL-Next	tr=Putative uncharacterized protein At4g36280; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	62%
Blast2go	protein	-	-	6.95475e-15	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	plant-type hypersensitive response	GO:0009626	Biological Process	6.95475e-15	80%
Blast2go	defense response to bacterium, incompatible interaction	GO:0009816	Biological Process	6.95475e-15	80%
Blast2go	protein binding	GO:0005515	Molecular Function	6.95475e-15	80%
Blast2go	endosome	GO:0005768	Cellular Component	6.95475e-15	80%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: Q84WN9

Fln msg: Separated hits, possible frame ERROR between 134 and 143, Unexpected stop codon in the beginning of your sequence, Unexpected STOP codon at 3' end. Distance to subject end: 412 aas, your sequence is shorter than subject: 94 - 626

Fln protein: S*PWLSLNAPALLIQDNGGGMDPAGLRRCVGLGFSSKDAANSVxxxxNGFKTSTMRLATDAIVFTRTLPPYGSLPKLSVALLSQTFLIKTSSQ*

Protein Length: 95

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACGCCCCCGCGTTGCTCATCCAAGATAACGGGGGCGGAATGGACCCCGCCGGCCTGCGCCGTTGCGTGGGTCTCGGCTTCTCCTCCAAAGACGCGGCAAACTCGGTGGGxxxxxxxxxCAACGGTTTCAAGACATCCACAATGCGGTTGGCTACGGACGCCATTGTCTTCACTCGCACTCTCCCGCCCTACGGTTCGCTCCCCAAGCTCAGCGTAGCGTTGCTCTCACAGACATTCTTAATCAAAACGTCTTCGCAGTGAGTGACAGGCC

Fln Alignment:

sp_v1.1_unigene66966___NAPALLIQDNGGGMDPAGLRRCVGLGFSSKDAANSVGxxxNGFKTSTMRLATDAIVFTRTLPPYGSLPKLSVALLSQTFLIKTSSQ*VT
Q84WN9_______________NSPALVFQDDGGGMDPAGLRKCMSLGYSSKKSNTTIGxxxNGFKTSTMRLGADAIVFSRS--TRGGTSTQSVGILSYTFLRKTGQDDVT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain